Difference between revisions of "2.1.1.79-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] == * direction: ** left-to-right * common-name: ** panto...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15278 RXN-15278] == * direction: ** left-to-right * common-name: ** β-n-acetylglucosaminyl...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15278 RXN-15278] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** pantothenate kinase
+
** β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.33 ec-2.7.1.33]
+
** [http://enzyme.expasy.org/EC/2.4.1.38 ec-2.4.1.38]
−
* synonymous:
 
−
** type iii pantothenate kinase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''=>''' 1 [[4-P-PANTOTHENATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-14553]][c] '''+''' 1 [[CPD-16494]][c] '''=>''' 1 [[I-antigens]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11632]]
+
* Gene: [[SJ14181]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11571]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3961]], phosphopantothenate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3961 PWY-3961]
+
* [[PWY-7837]], i antigen and I antigen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7837 PWY-7837]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
+
* [[PWY-7434]], terminal O-glycans residues modification (via type 2 precursor disaccharide): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[COA-PWY-1]], superpathway of coenzyme A biosynthesis III (mammals): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
 
−
** '''2''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16374 16374]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03018 R03018]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P0A6I3 P0A6I3]
 
−
** [http://www.uniprot.org/uniprot/Q9CFM3 Q9CFM3]
 
−
** [http://www.uniprot.org/uniprot/P44793 P44793]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pantothenate kinase}}
+
{{#set: common-name=β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase}}
−
{{#set: ec-number=ec-2.7.1.33}}
+
{{#set: ec-number=ec-2.4.1.38}}
−
{{#set: synonymous=type iii pantothenate kinase}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction RXN-15278

  • direction:
    • left-to-right
  • common-name:
    • β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7837, i antigen and I antigen biosynthesis: PWY-7837
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7434, terminal O-glycans residues modification (via type 2 precursor disaccharide): PWY-7434
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2.1.1.79-RXN&oldid=35763"