Difference between revisions of "SJ17633"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP-L-GALACTOSE GDP-L-GALACTOSE] == * common-name: ** gdp-β-l-galactose * smiles: ** c(c3(...")
(Created page with "Category:gene == Gene SJ15062 == * transcription-direction: ** positive * right-end-position: ** 67825 * left-end-position: ** 54639 * centisome-position: ** 18.02066...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP-L-GALACTOSE GDP-L-GALACTOSE] ==
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== Gene SJ15062 ==
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* common-name:
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* transcription-direction:
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** gdp-β-l-galactose
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** positive
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* smiles:
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* right-end-position:
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** c(c3(c(c(c(n2(c1(=c(c(nc(=n1)n)=o)n=c2)))o3)o)o))op(op(oc4(c(c(c(c(o4)co)o)o)o))([o-])=o)([o-])=o
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** 67825
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* inchi-key:
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* left-end-position:
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** mvmscbbuihutgj-jgqubwhwsa-l
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** 54639
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* molecular-weight:
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* centisome-position:
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** 603.329
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** 18.02066   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-1882]]
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* [[S.japonica_sterols_curated]]
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* [[RXN4FS-12]]
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== Reaction(s) associated ==
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* [[RXN4FS-13]]
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* [[6PGLUCONDEHYDROG-RXN]]
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* [[RXNQT-4141]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-1882]]
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* [[PYRROLINECARBREDUCT-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=gdp-β-l-galactose}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=mvmscbbuihutgj-jgqubwhwsa-l}}
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** Category: [[orthology]]
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{{#set: molecular-weight=603.329}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-9952]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-546]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[P122-PWY]]
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** '''16''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-3341]]
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** '''4''' reactions found over '''3''' reactions in the full pathway
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* [[PROSYN-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6344]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4981]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[ARG-PRO-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[OXIDATIVEPENT-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=67825}}
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{{#set: left-end-position=54639}}
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{{#set: centisome-position=18.02066    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=7}}

Revision as of 20:22, 18 December 2020

Gene SJ15062

  • transcription-direction:
    • positive
  • right-end-position:
    • 67825
  • left-end-position:
    • 54639
  • centisome-position:
    • 18.02066

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 3 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-4981
    • 3 reactions found over 6 reactions in the full pathway
  • ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




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