Difference between revisions of "SJ07847"

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(Created page with "Category:gene == Gene SJ03118 == * transcription-direction: ** positive * right-end-position: ** 73373 * left-end-position: ** 41395 * centisome-position: ** 33.134556...")
(Created page with "Category:gene == Gene SJ18318 == * transcription-direction: ** negative * right-end-position: ** 126351 * left-end-position: ** 102514 * centisome-position: ** 15.812643...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03118 ==
+
== Gene SJ18318 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 73373
+
** 126351
 
* left-end-position:
 
* left-end-position:
−
** 41395
+
** 102514
 
* centisome-position:
 
* centisome-position:
−
** 33.134556    
+
** 15.812643    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.2.1.21-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[3.2.1.58-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10769]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10773]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13602]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13603]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14179]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-2043]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RNA-POLYMERASE-SUBUNIT-KINASE-RXN]]
+
* [[RXN-5341]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8036]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[RXN-9674]]
−
{{#set: right-end-position=73373}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=41395}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=33.134556   }}
+
* [[RXN0-5395]]
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
** Category: [[orthology]]
−
{{#set: nb reaction associated=2}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6788]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7091]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7092]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3121]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5176]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6002]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=126351}}
 +
{{#set: left-end-position=102514}}
 +
{{#set: centisome-position=15.812643   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=12}}
 +
{{#set: nb pathway associated=6}}

Revision as of 20:23, 18 December 2020

Gene SJ18318

  • transcription-direction:
    • negative
  • right-end-position:
    • 126351
  • left-end-position:
    • 102514
  • centisome-position:
    • 15.812643

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6788
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7091
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7092
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3121
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5176
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6002
    • 1 reactions found over 2 reactions in the full pathway




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