Difference between revisions of "SJ09957"

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(Created page with "Category:gene == Gene SJ09367 == * transcription-direction: ** positive * right-end-position: ** 440879 * left-end-position: ** 428049 * centisome-position: ** 52.15931...")
(Created page with "Category:gene == Gene SJ10128 == * transcription-direction: ** positive * right-end-position: ** 345352 * left-end-position: ** 314078 * centisome-position: ** 79.099495...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09367 ==
+
== Gene SJ10128 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 440879
+
** 345352
 
* left-end-position:
 
* left-end-position:
−
** 428049
+
** 314078
 
* centisome-position:
 
* centisome-position:
−
** 52.15931    
+
** 79.099495    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-10642]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1435]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1G-1436]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1G-1437]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1G-1438]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1G-1439]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[TREHALOSE6PSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[UROGENDECARBOX-RXN]]
+
* [[TREHALOSEPHOSPHA-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7766]]
+
* [[PWYG-321]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''26''' reactions found over '''182''' reactions in the full pathway
−
* [[CHLOROPHYLL-SYN]]
+
* [[TRESYN-PWY]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[HEME-BIOSYNTHESIS-II]]
+
* [[PWY-7900]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7159]]
+
* [[PWY-881]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY0-1415]]
+
* [[TREHALOSESYN-PWY]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5531]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[HEMESYN2-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=440879}}
+
{{#set: right-end-position=345352}}
−
{{#set: left-end-position=428049}}
+
{{#set: left-end-position=314078}}
−
{{#set: centisome-position=52.15931   }}
+
{{#set: centisome-position=79.099495   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=5}}

Revision as of 20:24, 18 December 2020

Gene SJ10128

  • transcription-direction:
    • positive
  • right-end-position:
    • 345352
  • left-end-position:
    • 314078
  • centisome-position:
    • 79.099495

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWYG-321
    • 26 reactions found over 182 reactions in the full pathway
  • TRESYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-881
    • 1 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09957&oldid=43028"