Difference between revisions of "SJ06445"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ09955 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * PROTEIN-KINASE-RXN **...") |
(Created page with "Category:gene == Gene SJ01345 == * transcription-direction: ** negative * right-end-position: ** 125475 * left-end-position: ** 120826 * centisome-position: ** 79.38059...") |
||
Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ01345 == |
+ | * transcription-direction: | ||
+ | ** negative | ||
+ | * right-end-position: | ||
+ | ** 125475 | ||
+ | * left-end-position: | ||
+ | ** 120826 | ||
+ | * centisome-position: | ||
+ | ** 79.38059 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[3.1.26.4-RXN]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | {{#set: organism associated=S. | + | * [[3PGAREARR-RXN]] |
− | {{#set: nb reaction associated= | + | ** Category: [[annotation]] |
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[PWY-6142]] | ||
+ | ** '''10''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-7003]] | ||
+ | ** '''8''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7218]] | ||
+ | ** '''7''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[GLYCOLYSIS]] | ||
+ | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[P341-PWY]] | ||
+ | ** '''6''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-5723]] | ||
+ | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[P124-PWY]] | ||
+ | ** '''12''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[PWY-2221]] | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5484]] | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-1042]] | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-6886]] | ||
+ | ** '''8''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6901]] | ||
+ | ** '''10''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7124]] | ||
+ | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[GLUCONEO-PWY]] | ||
+ | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=125475}} | ||
+ | {{#set: left-end-position=120826}} | ||
+ | {{#set: centisome-position=79.38059 }} | ||
+ | {{#set: organism associated=S.japonica_sterols_curated}} | ||
+ | {{#set: nb reaction associated=2}} | ||
+ | {{#set: nb pathway associated=14}} |
Revision as of 20:26, 18 December 2020
Contents
Gene SJ01345
- transcription-direction:
- negative
- right-end-position:
- 125475
- left-end-position:
- 120826
- centisome-position:
- 79.38059
Organism(s) associated with this gene
Reaction(s) associated
- 3.1.26.4-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 3PGAREARR-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6142
- 10 reactions found over 13 reactions in the full pathway
- PWY-7003
- 8 reactions found over 6 reactions in the full pathway
- PWY-7218
- 7 reactions found over 4 reactions in the full pathway
- GLYCOLYSIS
- 11 reactions found over 12 reactions in the full pathway
- P341-PWY
- 6 reactions found over 10 reactions in the full pathway
- PWY-5723
- 10 reactions found over 10 reactions in the full pathway
- P124-PWY
- 12 reactions found over 15 reactions in the full pathway
- PWY-2221
- 6 reactions found over 9 reactions in the full pathway
- PWY-5484
- 10 reactions found over 11 reactions in the full pathway
- PWY-1042
- 9 reactions found over 10 reactions in the full pathway
- PWY-6886
- 8 reactions found over 5 reactions in the full pathway
- PWY-6901
- 10 reactions found over 8 reactions in the full pathway
- PWY-7124
- 8 reactions found over 8 reactions in the full pathway
- GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway