Difference between revisions of "SJ07300"
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(Created page with "Category:gene == Gene SJ16261 == * transcription-direction: ** negative * right-end-position: ** 138644 * left-end-position: ** 125989 * centisome-position: ** 18.268806...") |
(Created page with "Category:gene == Gene SJ12991 == * transcription-direction: ** negative * right-end-position: ** 568486 * left-end-position: ** 559079 * centisome-position: ** 75.4738...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ12991 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 568486 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 559079 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 75.4738 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | + | * [[FORMATETHFLIG-RXN]] | |
− | * [[ | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[ | + | * [[METHENYLTHFCYCLOHYDRO-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[METHYLENETHFDEHYDROG-NADP-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * [[PWY- | + | * [[PWY-2161]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-2201]] |
− | ** ''' | + | ** '''9''' reactions found over '''10''' reactions in the full pathway |
− | * [[ | + | * [[PWY-1722]] |
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[CODH-PWY]] |
− | ** ''' | + | ** '''4''' reactions found over '''9''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-3841]] |
− | ** ''' | + | ** '''9''' reactions found over '''11''' reactions in the full pathway |
− | * [[ | + | * [[1CMET2-PWY]] |
− | ** '''3''' reactions found over ''' | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5497]] |
− | ** ''' | + | ** '''10''' reactions found over '''24''' reactions in the full pathway |
− | * [[PWY- | + | * [[P164-PWY]] |
− | ** ''' | + | ** '''6''' reactions found over '''17''' reactions in the full pathway |
+ | * [[PWY-5030]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7909]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6613]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
</div> | </div> | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=568486}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=559079}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=75.4738 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_sterols_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
{{#set: nb pathway associated=11}} | {{#set: nb pathway associated=11}} |
Revision as of 20:28, 18 December 2020
Contents
Gene SJ12991
- transcription-direction:
- negative
- right-end-position:
- 568486
- left-end-position:
- 559079
- centisome-position:
- 75.4738
Organism(s) associated with this gene
Reaction(s) associated
- FORMATETHFLIG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- METHENYLTHFCYCLOHYDRO-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- METHYLENETHFDEHYDROG-NADP-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-2161
- 5 reactions found over 5 reactions in the full pathway
- PWY-2201
- 9 reactions found over 10 reactions in the full pathway
- PWY-1722
- 3 reactions found over 3 reactions in the full pathway
- CODH-PWY
- 4 reactions found over 9 reactions in the full pathway
- PWY-3841
- 9 reactions found over 11 reactions in the full pathway
- 1CMET2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- P164-PWY
- 6 reactions found over 17 reactions in the full pathway
- PWY-5030
- 3 reactions found over 6 reactions in the full pathway
- PWY-7909
- 3 reactions found over 4 reactions in the full pathway
- PWY-6613
- 2 reactions found over 2 reactions in the full pathway