Difference between revisions of "SJ15972"
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(Created page with "Category:gene == Gene SJ10941 == * transcription-direction: ** negative * right-end-position: ** 339047 * left-end-position: ** 334255 * centisome-position: ** 87.720146...") |
(Created page with "Category:gene == Gene SJ11913 == * transcription-direction: ** positive * right-end-position: ** 389858 * left-end-position: ** 374707 * centisome-position: ** 48.454765...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ11913 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 389858 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 374707 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 48.454765 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** Category: [[ | + | * [[G6PADH]] |
− | *** source: [[ | + | ** Category: [[orthology]] |
− | * [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
− | ** Category: [[ | + | * [[G6PADHh]] |
− | *** source: [[ | + | ** Category: [[orthology]] |
− | * [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
− | ** Category: [[ | + | * [[G6PBDH]] |
− | *** source: [[ | + | ** Category: [[orthology]] |
− | * [[RXN | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
+ | * [[G6PBDHh]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[GLU6PDEHYDROG-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[ | + | * [[RXN-14819]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-7268]] |
− | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | * [[PWY | + | * [[P122-PWY]] |
− | ** ''' | + | ** '''16''' reactions found over '''18''' reactions in the full pathway |
− | * [[ | + | * [[GLYCOLYSIS-E-D]] |
− | ** ''' | + | ** '''4''' reactions found over '''2''' reactions in the full pathway |
− | * [[PWY | + | * [[OXIDATIVEPENT-PWY]] |
− | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
− | * [[PWY | + | * [[RUMP-PWY]] |
− | ** ''' | + | ** '''4''' reactions found over '''6''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | {{#set: transcription-direction=positive}} |
− | {{#set: right-end-position= | + | {{#set: right-end-position=389858}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=374707}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=48.454765 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_sterols_curated}} |
{{#set: nb reaction associated=6}} | {{#set: nb reaction associated=6}} | ||
{{#set: nb pathway associated=5}} | {{#set: nb pathway associated=5}} |
Revision as of 20:29, 18 December 2020
Contents
Gene SJ11913
- transcription-direction:
- positive
- right-end-position:
- 389858
- left-end-position:
- 374707
- centisome-position:
- 48.454765
Organism(s) associated with this gene
Reaction(s) associated
- G6PADH
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- G6PADHh
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- G6PBDH
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- G6PBDHh
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- GLU6PDEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-14819
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7268
- 4 reactions found over 5 reactions in the full pathway
- P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- GLYCOLYSIS-E-D
- 4 reactions found over 2 reactions in the full pathway
- OXIDATIVEPENT-PWY
- 3 reactions found over 3 reactions in the full pathway
- RUMP-PWY
- 4 reactions found over 6 reactions in the full pathway