Difference between revisions of "CPD-14927"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] == * direction: ** left-to-right * common-name: ** biotin-[acetyl-coa-...")
(Created page with "Category:metabolite == Metabolite CPD-15688 == * common-name: ** (3z,5e)-dodeca-3,5-dienoyl-coa * smiles: ** ccccccc=cc=ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(o...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] ==
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== Metabolite CPD-15688 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** biotin-[acetyl-coa-carboxylase] ligase
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** (3z,5e)-dodeca-3,5-dienoyl-coa
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/6.3.4.15 ec-6.3.4.15]
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** ccccccc=cc=ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[ATP]][c] '''+''' 1 [[BCCP-L-lysine]][c] '''+''' 1 [[BIOTIN]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[BCCP-biotin-L-lysine]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
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** arquzfjqpywssl-nbluimthsa-j
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ10816]]
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** 941.776
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[RXN-14799]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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* Gene: [[SJ06657]]
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{{#set: common-name=(3z,5e)-dodeca-3,5-dienoyl-coa}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=arquzfjqpywssl-nbluimthsa-j}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=941.776}}
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* Gene: [[SJ19949]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ07132]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P06709 P06709]
 
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** [http://www.uniprot.org/uniprot/Q9PJ27 Q9PJ27]
 
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** [http://www.uniprot.org/uniprot/Q9CEQ6 Q9CEQ6]
 
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** [http://www.uniprot.org/uniprot/Q9CED9 Q9CED9]
 
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** [http://www.uniprot.org/uniprot/Q9JWI7 Q9JWI7]
 
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** [http://www.uniprot.org/uniprot/P48445 P48445]
 
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** [http://www.uniprot.org/uniprot/P72816 P72816]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=biotin-[acetyl-coa-carboxylase] ligase}}
 
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{{#set: ec-number=ec-6.3.4.15}}
 
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{{#set: nb gene associated=4}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 20:35, 18 December 2020

Metabolite CPD-15688

  • common-name:
    • (3z,5e)-dodeca-3,5-dienoyl-coa
  • smiles:
    • ccccccc=cc=ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • arquzfjqpywssl-nbluimthsa-j
  • molecular-weight:
    • 941.776

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-14927&oldid=47475"