Difference between revisions of "CPD-20012"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSDECARB-RXN P-PANTOCYSDECARB-RXN] == * direction: ** left-to-right * common-name: ** 4'-ph...")
(Created page with "Category:metabolite == Metabolite CPD-12127 == * common-name: ** menaquinol-10 * smiles: ** cc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=ccc1(...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSDECARB-RXN P-PANTOCYSDECARB-RXN] ==
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== Metabolite CPD-12127 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** 4'-phosphopantothenoylcysteine decarboxylase
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** menaquinol-10
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/4.1.1.36 ec-4.1.1.36]
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** cc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=ccc1(c(c)=c(o)c2(c=cc=cc(c(o)=1)=2)))c)c
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== Reaction formula ==
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* inchi-key:
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* 1 [[PROTON]][c] '''+''' 1 [[R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PANTETHEINE-P]][c]
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** wlkiromwgyxjma-uqunhumxsa-n
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ19413]]
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** 855.381
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[RXN-9361]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=menaquinol-10}}
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== Pathway(s) ==
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{{#set: inchi-key=inchikey=wlkiromwgyxjma-uqunhumxsa-n}}
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* [[PWY-7851]], coenzyme A biosynthesis II (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7851 PWY-7851]
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{{#set: molecular-weight=855.381}}
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[COA-PWY]], coenzyme A biosynthesis I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16794 16794]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03269 R03269]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=4'-phosphopantothenoylcysteine decarboxylase}}
 
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{{#set: ec-number=ec-4.1.1.36}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
 

Revision as of 20:36, 18 December 2020

Metabolite CPD-12127

  • common-name:
    • menaquinol-10
  • smiles:
    • cc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=ccc1(c(c)=c(o)c2(c=cc=cc(c(o)=1)=2)))c)c
  • inchi-key:
    • wlkiromwgyxjma-uqunhumxsa-n
  • molecular-weight:
    • 855.381

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-20012&oldid=47792"