Difference between revisions of "ExchangeSeed-FE+2"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11868 RXN-11868] == * direction: ** left-to-right * common-name: ** trna (cytidine32/guanosine3...") |
(Created page with "Category:reaction == Reaction GLUCONOKIN-RXN == * direction: ** left-to-right * common-name: ** d-gluconate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.12 ec...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction GLUCONOKIN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** d-gluconate kinase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.7.1.12 ec-2.7.1.12] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[GLUCONATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-2961]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ14827]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-5530]], sorbitol biosynthesis II: |
− | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
+ | * [[IDNCAT-PWY]], L-idonate degradation: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[GLUCONSUPER-PWY]], D-gluconate degradation: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19434 19434] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01737 R01737] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P12011 P12011] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JRF7 Q9JRF7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8X6W0 Q8X6W0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CDN5 Q9CDN5] | ||
+ | ** [http://www.uniprot.org/uniprot/P39208 P39208] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=d-gluconate kinase}} |
− | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-2.7.1.12}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}} |
Revision as of 20:39, 18 December 2020
Contents
Reaction GLUCONOKIN-RXN
- direction:
- left-to-right
- common-name:
- d-gluconate kinase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ14827
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5530, sorbitol biosynthesis II:
- 2 reactions found over 3 reactions in the full pathway
- IDNCAT-PWY, L-idonate degradation:
- 2 reactions found over 3 reactions in the full pathway
- GLUCONSUPER-PWY, D-gluconate degradation:
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links