Difference between revisions of "RXN-13301"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13185 RXN-13185] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.2...") |
(Created page with "Category:reaction == Reaction PRPPSYN-RXN == * direction: ** reversible * common-name: ** ribose phosphate diphosphokinase ** ribose-phosphate diphosphokinase * ec-number:...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction PRPPSYN-RXN == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
+ | * common-name: | ||
+ | ** ribose phosphate diphosphokinase | ||
+ | ** ribose-phosphate diphosphokinase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.7.6.1 ec-2.7.6.1] |
== Reaction formula == | == Reaction formula == | ||
− | * | + | * 1 [[ATP]][c] '''+''' 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PRPP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ07300]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08336]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ17219]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ11019]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY0-662]], PRPP biosynthesis: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15612 15612] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049] |
− | * | + | * UNIPROT: |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/Q63468 Q63468] |
+ | ** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4] | ||
+ | ** [http://www.uniprot.org/uniprot/O67556 O67556] | ||
+ | ** [http://www.uniprot.org/uniprot/P44328 P44328] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15] | ||
+ | ** [http://www.uniprot.org/uniprot/P56184 P56184] | ||
+ | ** [http://www.uniprot.org/uniprot/P65235 P65235] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8] | ||
+ | ** [http://www.uniprot.org/uniprot/P42816 P42816] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59988 Q59988] | ||
+ | ** [http://www.uniprot.org/uniprot/P14193 P14193] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A717 P0A717] | ||
+ | ** [http://www.uniprot.org/uniprot/P60891 P60891] | ||
+ | ** [http://www.uniprot.org/uniprot/P11908 P11908] | ||
+ | ** [http://www.uniprot.org/uniprot/P21108 P21108] | ||
+ | ** [http://www.uniprot.org/uniprot/P60892 P60892] | ||
+ | ** [http://www.uniprot.org/uniprot/P09330 P09330] | ||
+ | ** [http://www.uniprot.org/uniprot/P32895 P32895] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59489 Q59489] | ||
+ | ** [http://www.uniprot.org/uniprot/P38620 P38620] | ||
+ | ** [http://www.uniprot.org/uniprot/P38063 P38063] | ||
+ | ** [http://www.uniprot.org/uniprot/P38689 P38689] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42581 Q42581] | ||
+ | ** [http://www.uniprot.org/uniprot/P41831 P41831] | ||
+ | ** [http://www.uniprot.org/uniprot/P46585 P46585] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42583 Q42583] | ||
+ | ** [http://www.uniprot.org/uniprot/Q14558 Q14558] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55848 Q55848] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49042 Q49042] | ||
+ | ** [http://www.uniprot.org/uniprot/O64888 O64888] | ||
+ | ** [http://www.uniprot.org/uniprot/Q680A5 Q680A5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66] | ||
+ | </div> | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
− | {{#set: ec-number=ec- | + | {{#set: common-name=ribose phosphate diphosphokinase|ribose-phosphate diphosphokinase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.7.6.1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=4}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction category=annotation|orthology}} |
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} |
Revision as of 20:41, 18 December 2020
Contents
Reaction PRPPSYN-RXN
- direction:
- reversible
- common-name:
- ribose phosphate diphosphokinase
- ribose-phosphate diphosphokinase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ07300
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08336
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ17219
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ11019
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY0-662, PRPP biosynthesis:
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links