Difference between revisions of "RXN-12382"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1A0-6325 PWY1A0-6325] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-20117...") |
(Created page with "Category:reaction == Reaction RXN0-1133 == * direction: ** left-to-right * common-name: ** lipoate acetyltransferase ** pyruvate dehydrogenase (nad+) * ec-number: ** [http...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction RXN0-1133 == |
− | * | + | * direction: |
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** lipoate acetyltransferase |
− | == Reaction(s) | + | ** pyruvate dehydrogenase (nad+) |
− | * [[ | + | * ec-number: |
− | == | + | ** [http://enzyme.expasy.org/EC/2.3.1.12 ec-2.3.1.12] |
− | * [http:// | + | == Reaction formula == |
− | * [http:// | + | * 1 [[CO-A]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Pyruvate-dehydrogenase-dihydrolipoate]][c] |
− | * [http:// | + | == Gene(s) associated with this reaction == |
− | * [http:// | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | * [http:// | + | * Gene: [[SJ00971]] |
− | * [http:// | + | ** Category: [[annotation]] |
− | * [http:// | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * [http:// | + | * Gene: [[SJ17268]] |
− | * [http:// | + | ** Category: [[annotation]] |
− | * [http:// | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * [http:// | + | * Gene: [[SJ10087]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | {{#set: nb | + | * Gene: [[SJ10725]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ01042]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ10792]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ13527]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
+ | == Pathway(s) == | ||
+ | * [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02569 R02569] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q01991 Q01991] | ||
+ | ** [http://www.uniprot.org/uniprot/P12695 P12695] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M2M8 Q7M2M8] | ||
+ | ** [http://www.uniprot.org/uniprot/P10515 P10515] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39082 Q39082] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9TRP7 Q9TRP7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0X6 Q7M0X6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59098 Q59098] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PF09 Q9PF09] | ||
+ | ** [http://www.uniprot.org/uniprot/P35489 P35489] | ||
+ | ** [http://www.uniprot.org/uniprot/P21883 P21883] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59658 Q59658] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59298 Q59298] | ||
+ | ** [http://www.uniprot.org/uniprot/P45118 P45118] | ||
+ | ** [http://www.uniprot.org/uniprot/Q54102 Q54102] | ||
+ | ** [http://www.uniprot.org/uniprot/P11961 P11961] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59821 Q59821] | ||
+ | ** [http://www.uniprot.org/uniprot/P08461 P08461] | ||
+ | ** [http://www.uniprot.org/uniprot/Q16791 Q16791] | ||
+ | ** [http://www.uniprot.org/uniprot/Q41737 Q41737] | ||
+ | ** [http://www.uniprot.org/uniprot/O64968 O64968] | ||
+ | ** [http://www.uniprot.org/uniprot/P10802 P10802] | ||
+ | ** [http://www.uniprot.org/uniprot/P06959 P06959] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=pyruvate dehydrogenase (nad+)|lipoate acetyltransferase}} | ||
+ | {{#set: ec-number=ec-2.3.1.12}} | ||
+ | {{#set: nb gene associated=7}} | ||
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 20:45, 18 December 2020
Contents
Reaction RXN0-1133
- direction:
- left-to-right
- common-name:
- lipoate acetyltransferase
- pyruvate dehydrogenase (nad+)
- ec-number:
Reaction formula
- 1 CO-A[c] + 1 Pyruvate-dehydrogenase-acetylDHlipoyl[c] => 1 ACETYL-COA[c] + 1 Pyruvate-dehydrogenase-dihydrolipoate[c]
Gene(s) associated with this reaction
- Gene: SJ00971
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ17268
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ10087
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ10725
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ01042
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ10792
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ13527
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PYRUVDEHYD-PWY, pyruvate decarboxylation to acetyl CoA:
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links