Difference between revisions of "SJ00095"
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(Created page with "Category:gene == Gene SJ16998 == * transcription-direction: ** negative * right-end-position: ** 248376 * left-end-position: ** 216684 * centisome-position: ** 79.246895...") |
(Created page with "Category:gene == Gene SJ13639 == * transcription-direction: ** negative * right-end-position: ** 171587 * left-end-position: ** 159509 * centisome-position: ** 48.043144...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ13639 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 171587 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 159509 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 48.043144 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[ASNSYNA-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[ASNSYNB-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | ** Category: [[orthology]] | |
− | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | *** source: [[ | + | * [[GLUTAMIN-RXN]] |
− | * [[ | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY | + | * [[ASPARAGINESYN-PWY]] |
− | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
− | * [[ | + | * [[ASPARAGINE-BIOSYNTHESIS]] |
− | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
− | * [[PWY | + | * [[CITRULBIO-PWY]] |
− | ** ''' | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
− | * [[PWY | + | * [[GLUTAMINDEG-PWY]] |
− | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=171587}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=159509}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=48.043144 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
{{#set: nb pathway associated=4}} | {{#set: nb pathway associated=4}} |
Revision as of 14:44, 5 January 2021
Contents
Gene SJ13639
- transcription-direction:
- negative
- right-end-position:
- 171587
- left-end-position:
- 159509
- centisome-position:
- 48.043144
Organism(s) associated with this gene
Reaction(s) associated
- ASNSYNA-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- ASNSYNB-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- GLUTAMIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- ASPARAGINESYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- ASPARAGINE-BIOSYNTHESIS
- 1 reactions found over 1 reactions in the full pathway
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- GLUTAMINDEG-PWY
- 1 reactions found over 1 reactions in the full pathway