Difference between revisions of "SJ22284"
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(Created page with "Category:gene == Gene SJ22092 == * transcription-direction: ** negative * right-end-position: ** 94645 * left-end-position: ** 90933 * centisome-position: ** 15.500172...") |
(Created page with "Category:gene == Gene SJ09703 == * transcription-direction: ** negative * right-end-position: ** 146010 * left-end-position: ** 140594 * centisome-position: ** 17.299534...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ09703 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 146010 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 140594 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 17.299534 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[ACYL-COA-HYDROLASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[PALMITOYL-COA-HYDROLASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-10708]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-13430]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[RXN-13435]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-16063]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-16395]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9624]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9626]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9627]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9628]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9629]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9666]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[THIOESTER-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** ''' | + | * [[PWY-321]] |
− | * [[PWY- | + | ** '''3''' reactions found over '''16''' reactions in the full pathway |
− | ** '''8''' reactions found over '''8''' reactions in the full pathway | + | * [[PWY-5994]] |
− | * [[PWY- | + | ** '''31''' reactions found over '''31''' reactions in the full pathway |
− | ** '''6''' reactions found over ''' | + | * [[PWY-1121]] |
− | * [[PWY- | + | ** '''9''' reactions found over '''19''' reactions in the full pathway |
− | ** ''' | + | * [[PWY-6733]] |
+ | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-735]] | ||
+ | ** '''16''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[PWY-7723]] | ||
+ | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY3O-355]] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5972]] | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5996]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5148]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | </div> | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=146010}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=140594}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=17.299534 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=14}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=10}} |
Revision as of 14:49, 5 January 2021
Contents
Gene SJ09703
- transcription-direction:
- negative
- right-end-position:
- 146010
- left-end-position:
- 140594
- centisome-position:
- 17.299534
Organism(s) associated with this gene
Reaction(s) associated
- ACYL-COA-HYDROLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PALMITOYL-COA-HYDROLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10708
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13430
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13435
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16063
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16395
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9624
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9626
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9627
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9628
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9629
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9666
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- THIOESTER-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-321
- 3 reactions found over 16 reactions in the full pathway
- PWY-5994
- 31 reactions found over 31 reactions in the full pathway
- PWY-1121
- 9 reactions found over 19 reactions in the full pathway
- PWY-6733
- 8 reactions found over 18 reactions in the full pathway
- PWY-735
- 16 reactions found over 19 reactions in the full pathway
- PWY-7723
- 2 reactions found over 8 reactions in the full pathway
- PWY3O-355
- 6 reactions found over 6 reactions in the full pathway
- PWY-5972
- 4 reactions found over 6 reactions in the full pathway
- PWY-5996
- 2 reactions found over 2 reactions in the full pathway
- PWY-5148
- 1 reactions found over 1 reactions in the full pathway