Difference between revisions of "SJ06110"
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(Created page with "Category:gene == Gene SJ02470 == * transcription-direction: ** negative * right-end-position: ** 101859 * left-end-position: ** 67710 * centisome-position: ** 50.186413...") |
(Created page with "Category:gene == Gene SJ07831 == * transcription-direction: ** positive * right-end-position: ** 115047 * left-end-position: ** 54399 * centisome-position: ** 12.133696...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07831 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 115047 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 54399 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 12.133696 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[RXN-1]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | ** Category: [[ | + | * [[RXN-10778]] |
− | *** source: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | *** source: [[ | + | * [[RXN-10817]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10907]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10908]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10910]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10913]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-11067]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-1401]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-5821]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9598]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN6666-4]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** '''9''' reactions found over ''' | + | * [[PWY-0]] |
− | * [[PWY- | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
− | ** ''' | + | * [[PWY-6313]] |
− | {{#set: transcription-direction= | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
− | {{#set: right-end-position= | + | * [[PWY-6318]] |
− | {{#set: left-end-position= | + | ** '''4''' reactions found over '''9''' reactions in the full pathway |
− | {{#set: centisome-position= | + | * [[PWY-6342]] |
− | {{#set: organism associated=S. | + | ** '''8''' reactions found over '''13''' reactions in the full pathway |
− | {{#set: nb reaction associated= | + | * [[PWY-6399]] |
− | {{#set: nb pathway associated= | + | ** '''1''' reactions found over '''4''' reactions in the full pathway |
+ | * [[PWY-6307]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-3181]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7431]] | ||
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6802]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY6666-2]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=115047}} | ||
+ | {{#set: left-end-position=54399}} | ||
+ | {{#set: centisome-position=12.133696 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=12}} | ||
+ | {{#set: nb pathway associated=10}} |
Revision as of 14:50, 5 January 2021
Contents
Gene SJ07831
- transcription-direction:
- positive
- right-end-position:
- 115047
- left-end-position:
- 54399
- centisome-position:
- 12.133696
Organism(s) associated with this gene
Reaction(s) associated
- RXN-1
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10778
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10817
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10907
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10908
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10910
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10913
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11067
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-1401
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-5821
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9598
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN6666-4
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-0
- 2 reactions found over 4 reactions in the full pathway
- PWY-6313
- 6 reactions found over 7 reactions in the full pathway
- PWY-6318
- 4 reactions found over 9 reactions in the full pathway
- PWY-6342
- 8 reactions found over 13 reactions in the full pathway
- PWY-6399
- 1 reactions found over 4 reactions in the full pathway
- PWY-6307
- 4 reactions found over 4 reactions in the full pathway
- PWY-3181
- 2 reactions found over 3 reactions in the full pathway
- PWY-7431
- 3 reactions found over 8 reactions in the full pathway
- PWY-6802
- 3 reactions found over 4 reactions in the full pathway
- PWY6666-2
- 3 reactions found over 5 reactions in the full pathway