Difference between revisions of "SJ17737"
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(Created page with "Category:gene == Gene SJ05933 == * transcription-direction: ** negative * right-end-position: ** 5260 * left-end-position: ** 3581 * centisome-position: ** 4.148325 ==...") |
(Created page with "Category:gene == Gene SJ03090 == * transcription-direction: ** positive * right-end-position: ** 26212 * left-end-position: ** 24068 * centisome-position: ** 19.211521...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ03090 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 26212 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 24068 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 19.211521 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[ACYLCOADEHYDROG-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | * [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-10696]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10706]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10707]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-11026]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12518]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12669]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14576]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14771]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14775]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14785]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14789]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14796]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-16134]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17113]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** '''2''' reactions found over ''' | + | * [[FAO-PWY]] |
− | * [[PWY- | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
− | ** ''' | + | * [[PWY-735]] |
− | {{#set: transcription-direction= | + | ** '''16''' reactions found over '''19''' reactions in the full pathway |
− | {{#set: right-end-position= | + | * [[PWY-7007]] |
− | {{#set: left-end-position= | + | ** '''4''' reactions found over '''6''' reactions in the full pathway |
− | {{#set: centisome-position= | + | * [[PWY-7288]] |
− | {{#set: organism associated=S. | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | {{#set: nb reaction associated= | + | * [[PWY-5136]] |
− | {{#set: nb pathway associated= | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY66-391]] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6837]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6920]] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7291]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7337]] | ||
+ | ** '''6''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-7338]] | ||
+ | ** '''6''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-7340]] | ||
+ | ** '''5''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-7606]] | ||
+ | ** '''8''' reactions found over '''14''' reactions in the full pathway | ||
+ | * [[PWY-7726]] | ||
+ | ** '''8''' reactions found over '''13''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=26212}} | ||
+ | {{#set: left-end-position=24068}} | ||
+ | {{#set: centisome-position=19.211521 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=16}} | ||
+ | {{#set: nb pathway associated=14}} |
Revision as of 14:51, 5 January 2021
Contents
Gene SJ03090
- transcription-direction:
- positive
- right-end-position:
- 26212
- left-end-position:
- 24068
- centisome-position:
- 19.211521
Organism(s) associated with this gene
Reaction(s) associated
- ACYLCOADEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10696
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10706
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10707
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11026
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12518
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12669
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14576
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14771
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14775
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14785
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14789
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14796
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16134
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17113
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- FAO-PWY
- 6 reactions found over 7 reactions in the full pathway
- PWY-735
- 16 reactions found over 19 reactions in the full pathway
- PWY-7007
- 4 reactions found over 6 reactions in the full pathway
- PWY-7288
- 4 reactions found over 5 reactions in the full pathway
- PWY-5136
- 5 reactions found over 5 reactions in the full pathway
- PWY66-391
- 6 reactions found over 7 reactions in the full pathway
- PWY-6837
- 4 reactions found over 5 reactions in the full pathway
- PWY-6920
- 5 reactions found over 6 reactions in the full pathway
- PWY-7291
- 2 reactions found over 4 reactions in the full pathway
- PWY-7337
- 6 reactions found over 12 reactions in the full pathway
- PWY-7338
- 6 reactions found over 12 reactions in the full pathway
- PWY-7340
- 5 reactions found over 10 reactions in the full pathway
- PWY-7606
- 8 reactions found over 14 reactions in the full pathway
- PWY-7726
- 8 reactions found over 13 reactions in the full pathway