Difference between revisions of "RXN-14353"
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(Created page with "Category:reaction == Reaction DADPKIN-RXN == * direction: ** left-to-right * common-name: ** nucleoside diphosphate kinase ** dadp kinase * ec-number: ** [http://enzyme.ex...") |
(Created page with "Category:reaction == Reaction FRUCTOKINASE-RXN == * direction: ** left-to-right * common-name: ** manno(fructo)kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.4...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction FRUCTOKINASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** manno(fructo)kinase |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2.7.4 | + | ** [http://enzyme.expasy.org/EC/2.7.1.4 ec-2.7.1.4] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ATP]][c] '''+''' 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[BETA-D-FRUCTOSE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ12224]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ04919]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | *** Source: [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
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== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-3801]], sucrose degradation II (sucrose synthase): |
− | ** '''4''' reactions found over '''4''' reactions in the full pathway | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-621]], sucrose degradation III (sucrose invertase): |
− | ** '''2''' reactions found over ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
− | * [[PWY- | + | * [[P122-PWY]], heterolactic fermentation: |
− | ** '''3''' reactions found over ''' | + | ** '''16''' reactions found over '''18''' reactions in the full pathway |
+ | * [[PWY-4101]], D-sorbitol degradation I: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[SUCROSEUTIL2-PWY]], sucrose degradation VII (sucrose 3-dehydrogenase): | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6531]], mannitol cycle: | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[SUCUTIL-PWY]], sucrose degradation I (sucrose phosphotransferase): | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
− | |||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16126 16126] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00760 R00760] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q09124 Q09124] | ||
+ | ** [http://www.uniprot.org/uniprot/P24261 P24261] | ||
+ | ** [http://www.uniprot.org/uniprot/Q03417 Q03417] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9V0T7 Q9V0T7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CFI9 Q9CFI9] | ||
+ | ** [http://www.uniprot.org/uniprot/P22824 P22824] | ||
+ | ** [http://www.uniprot.org/uniprot/P26420 P26420] | ||
+ | ** [http://www.uniprot.org/uniprot/P26984 P26984] | ||
+ | ** [http://www.uniprot.org/uniprot/P37829 P37829] | ||
+ | ** [http://www.uniprot.org/uniprot/P43468 P43468] | ||
+ | ** [http://www.uniprot.org/uniprot/P73521 P73521] | ||
+ | ** [http://www.uniprot.org/uniprot/O82616 O82616] | ||
+ | ** [http://www.uniprot.org/uniprot/O04897 O04897] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42645 Q42645] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=manno(fructo)kinase}} |
− | {{#set: ec-number=ec-2.7.4 | + | {{#set: ec-number=ec-2.7.1.4}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
− | {{#set: reconstruction tool=pantograph | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Revision as of 15:01, 5 January 2021
Contents
Reaction FRUCTOKINASE-RXN
- direction:
- left-to-right
- common-name:
- manno(fructo)kinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 BETA-D-FRUCTOSE[c] => 1 ADP[c] + 1 FRUCTOSE-6P[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ12224
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ04919
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-3801, sucrose degradation II (sucrose synthase):
- 4 reactions found over 5 reactions in the full pathway
- PWY-621, sucrose degradation III (sucrose invertase):
- 3 reactions found over 4 reactions in the full pathway
- P122-PWY, heterolactic fermentation:
- 16 reactions found over 18 reactions in the full pathway
- PWY-4101, D-sorbitol degradation I:
- 2 reactions found over 3 reactions in the full pathway
- PWY-5384, sucrose degradation IV (sucrose phosphorylase):
- 3 reactions found over 4 reactions in the full pathway
- SUCROSEUTIL2-PWY, sucrose degradation VII (sucrose 3-dehydrogenase):
- 1 reactions found over 4 reactions in the full pathway
- PWY-6531, mannitol cycle:
- 4 reactions found over 5 reactions in the full pathway
- SUCUTIL-PWY, sucrose degradation I (sucrose phosphotransferase):
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: