Difference between revisions of "3.4.21.105-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-16097 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.93 ec-1.3.1.93] == Reaction formula == * 1 CP...") |
(Created page with "Category:reaction == Reaction 2.8.2.30-RXN == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glucosamine 3-o-sulfotransferase * ec-number: ** [http://en...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction 2.8.2.30-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** [heparan sulfate]-glucosamine 3-o-sulfotransferase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.8.2.30 ec-2.8.2.30] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[HEPARIN-GLUCOSAMINE]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[HEPARIN-GLUCOSAMINE-3-O-SULFATE]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ07694]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ00944]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ17721]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6558]], heparan sulfate biosynthesis (late stages): |
− | ** ''' | + | ** '''7''' reactions found over '''13''' reactions in the full pathway |
− | |||
− | |||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15462 15462] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R05798 R05798] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: ec-number=ec- | + | {{#set: common-name=[heparan sulfate]-glucosamine 3-o-sulfotransferase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.8.2.30}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=3}} |
− | {{#set: reconstruction category= | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction tool=pathwaytools}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction comment=n.a}} |
+ | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 15:01, 5 January 2021
Contents
Reaction 2.8.2.30-RXN
- direction:
- left-to-right
- common-name:
- [heparan sulfate]-glucosamine 3-o-sulfotransferase
- ec-number:
Reaction formula
- 1 HEPARIN-GLUCOSAMINE[c] + 1 PAPS[c] => 1 3-5-ADP[c] + 1 HEPARIN-GLUCOSAMINE-3-O-SULFATE[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ07694
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ00944
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ17721
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6558, heparan sulfate biosynthesis (late stages):
- 7 reactions found over 13 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
Property "Common-name" (as page type) with input value "heparan sulfate]-glucosamine 3-o-sulfotransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.