Difference between revisions of "RXN-4307"
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(Created page with "Category:reaction == Reaction ExchangeSeed-CL- == * direction: ** reversible == Reaction formula == * 1.0 CL-[C-BOUNDARY] '''<=>''' 1.0 CL-[e] == Gene(s) associate...") |
(Created page with "Category:reaction == Reaction 3.1.4.17-RXN == * direction: ** left-to-right * common-name: ** 3',5'-cyclic-nucleotide phosphodiesterase * ec-number: ** [http://enzyme.expa...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction 3.1.4.17-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
+ | * common-name: | ||
+ | ** 3',5'-cyclic-nucleotide phosphodiesterase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/3.1.4.17 ec-3.1.4.17] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[Cyclic-3-5-Nucleoside-Monophosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleoside-Monophosphates]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * Gene: [[SJ04705]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ18680]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14703]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03999]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ18679]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ09726]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ14526]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ10845]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: nb gene associated= | + | * RHEA: |
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14654 14654] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P12019 P12019] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56686 Q56686] | ||
+ | ** [http://www.uniprot.org/uniprot/P14099 P14099] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01066 Q01066] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01061 Q01061] | ||
+ | ** [http://www.uniprot.org/uniprot/P14100 P14100] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01065 Q01065] | ||
+ | ** [http://www.uniprot.org/uniprot/P27815 P27815] | ||
+ | ** [http://www.uniprot.org/uniprot/O66909 O66909] | ||
+ | ** [http://www.uniprot.org/uniprot/P14270 P14270] | ||
+ | ** [http://www.uniprot.org/uniprot/O27755 O27755] | ||
+ | ** [http://www.uniprot.org/uniprot/P44685 P44685] | ||
+ | ** [http://www.uniprot.org/uniprot/P22434 P22434] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AEW4 P0AEW4] | ||
+ | ** [http://www.uniprot.org/uniprot/O26280 O26280] | ||
+ | ** [http://www.uniprot.org/uniprot/O06629 O06629] | ||
+ | ** [http://www.uniprot.org/uniprot/O30241 O30241] | ||
+ | ** [http://www.uniprot.org/uniprot/P14644 P14644] | ||
+ | ** [http://www.uniprot.org/uniprot/P54748 P54748] | ||
+ | ** [http://www.uniprot.org/uniprot/Q13945 Q13945] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01062 Q01062] | ||
+ | ** [http://www.uniprot.org/uniprot/P54827 P54827] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01064 Q01064] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9NP56 Q9NP56] | ||
+ | ** [http://www.uniprot.org/uniprot/O60658 O60658] | ||
+ | ** [http://www.uniprot.org/uniprot/P36599 P36599] | ||
+ | ** [http://www.uniprot.org/uniprot/P30645 P30645] | ||
+ | ** [http://www.uniprot.org/uniprot/Q45859 Q45859] | ||
+ | ** [http://www.uniprot.org/uniprot/P12252 P12252] | ||
+ | ** [http://www.uniprot.org/uniprot/P06776 P06776] | ||
+ | ** [http://www.uniprot.org/uniprot/Q08493 Q08493] | ||
+ | ** [http://www.uniprot.org/uniprot/Q63421 Q63421] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=3',5'-cyclic-nucleotide phosphodiesterase}} | ||
+ | {{#set: ec-number=ec-3.1.4.17}} | ||
+ | {{#set: nb gene associated=8}} | ||
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:02, 5 January 2021
Contents
Reaction 3.1.4.17-RXN
- direction:
- left-to-right
- common-name:
- 3',5'-cyclic-nucleotide phosphodiesterase
- ec-number:
Reaction formula
- 1 Cyclic-3-5-Nucleoside-Monophosphates[c] + 1 WATER[c] => 1 Nucleoside-Monophosphates[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ04705
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ18680
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ14703
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ03999
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ18679
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ09726
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ14526
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ10845
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links