Difference between revisions of "RXN3DJ-25"
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(Created page with "Category:reaction == Reaction RXN-14473 == * direction: ** left-to-right * common-name: ** nucleotidase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.31 ec-3.1.3.31]...") |
(Created page with "Category:reaction == Reaction RXN-2962 == * direction: ** left-to-right * common-name: ** formaldehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.284...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN- | + | == Reaction RXN-2962 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** formaldehyde dehydrogenase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.284 ec-1.1.1.284] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[S-HYDROXYMETHYLGLUTATHIONE]][c] '''=>''' 1 [[CPD-548]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ21601]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | + | ** Category: [[orthology]] | |
− | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
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− | ** Category: [[ | ||
− | *** Source: [[ | ||
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== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-1801]], formaldehyde oxidation II (glutathione-dependent): | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R07140 R07140] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=formaldehyde dehydrogenase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.1.1.284}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:06, 5 January 2021
Contents
Reaction RXN-2962
- direction:
- left-to-right
- common-name:
- formaldehyde dehydrogenase
- ec-number:
Reaction formula
- 1 NAD-P-OR-NOP[c] + 1 S-HYDROXYMETHYLGLUTATHIONE[c] => 1 CPD-548[c] + 1 NADH-P-OR-NOP[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ21601
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-1801, formaldehyde oxidation II (glutathione-dependent):
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- LIGAND-RXN: