Difference between revisions of "SJ14345"
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(Created page with "Category:gene == Gene SJ21697 == * transcription-direction: ** positive * right-end-position: ** 865809 * left-end-position: ** 854205 * centisome-position: ** 75.51271...") |
(Created page with "Category:gene == Gene SJ13639 == * transcription-direction: ** negative * right-end-position: ** 171587 * left-end-position: ** 159509 * centisome-position: ** 48.043144...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13639 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 171587 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 159509 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 48.043144 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ASNSYNA-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[ASNSYNB-RXN]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GLUTAMIN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[ASPARAGINESYN-PWY]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[ASPARAGINE-BIOSYNTHESIS]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[CITRULBIO-PWY]] | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[GLUTAMINDEG-PWY]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=171587}} | ||
| + | {{#set: left-end-position=159509}} | ||
| + | {{#set: centisome-position=48.043144 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=4}} | ||
Revision as of 15:15, 5 January 2021
Contents
Gene SJ13639
- transcription-direction:
- negative
- right-end-position:
- 171587
- left-end-position:
- 159509
- centisome-position:
- 48.043144
Organism(s) associated with this gene
Reaction(s) associated
- ASNSYNA-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- ASNSYNB-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- GLUTAMIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- ASPARAGINESYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- ASPARAGINE-BIOSYNTHESIS
- 1 reactions found over 1 reactions in the full pathway
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- GLUTAMINDEG-PWY
- 1 reactions found over 1 reactions in the full pathway
