Difference between revisions of "SJ03999"

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(Created page with "Category:gene == Gene SJ20898 == * transcription-direction: ** positive * right-end-position: ** 516561 * left-end-position: ** 509996 * centisome-position: ** 83.537704...")
(Created page with "Category:gene == Gene SJ16813 == * transcription-direction: ** negative * right-end-position: ** 41310 * left-end-position: ** 15520 * centisome-position: ** 5.6094694...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20898 ==
+
== Gene SJ16813 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 516561
+
** 41310
 
* left-end-position:
 
* left-end-position:
−
** 509996
+
** 15520
 
* centisome-position:
 
* centisome-position:
−
** 83.537704    
+
** 5.6094694    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[3.1.1.64-RXN]]
 
* [[3.1.1.64-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[3.1.1.73-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 31: Line 28:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12086]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* [[RXN-12252]]
 
* [[RXN-12252]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12579]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* [[RXNQT-4366]]
 
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6784]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
* [[PWY-6303]]
 
* [[PWY-6303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6857]]
 
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[LIPAS-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=41310}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=15520}}
−
{{#set: right-end-position=516561}}
+
{{#set: centisome-position=5.6094694   }}
−
{{#set: left-end-position=509996}}
 
−
{{#set: centisome-position=83.537704   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=2}}

Revision as of 15:18, 5 January 2021

Gene SJ16813

  • transcription-direction:
    • negative
  • right-end-position:
    • 41310
  • left-end-position:
    • 15520
  • centisome-position:
    • 5.6094694

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




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