Difference between revisions of "SJ16805"
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(Created page with "Category:gene == Gene SJ09270 == * transcription-direction: ** positive * right-end-position: ** 34891 * left-end-position: ** 3590 * centisome-position: ** 8.348449 =...") |
(Created page with "Category:gene == Gene SJ07311 == * transcription-direction: ** negative * right-end-position: ** 79246 * left-end-position: ** 63438 * centisome-position: ** 13.67098...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07311 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 79246 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 63438 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 13.67098 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN0-2161]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[RXN | + | * [[SERINE--TRNA-LIGASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY0-901]] |
| − | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-6281]] |
| − | {{#set: right-end-position= | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[TRNA-CHARGING-PWY]] |
| − | {{#set: centisome-position= | + | ** '''21''' reactions found over '''21''' reactions in the full pathway |
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=79246}} | ||
| + | {{#set: left-end-position=63438}} | ||
| + | {{#set: centisome-position=13.67098 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 13:07, 14 January 2021
Contents
Gene SJ07311
- transcription-direction:
- negative
- right-end-position:
- 79246
- left-end-position:
- 63438
- centisome-position:
- 13.67098
Organism(s) associated with this gene
Reaction(s) associated
- RXN0-2161
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SERINE--TRNA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY0-901
- 2 reactions found over 3 reactions in the full pathway
- PWY-6281
- 4 reactions found over 4 reactions in the full pathway
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
