Difference between revisions of "RXN-13322"

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(Created page with "Category:reaction == Reaction PYRROLINECARBDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** 1-pyrroline-5-carboxylate dehydrogenase == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RXN-18301 == * direction: ** left-to-right * common-name: ** galactosylceramide sulfotransferase ** β-galactosyl-n-acylsphingosine sulfo...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PYRROLINECARBDEHYDROG-RXN ==
+
== Reaction RXN-18301 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 1-pyrroline-5-carboxylate dehydrogenase
+
** galactosylceramide sulfotransferase
 +
** β-galactosyl-n-acylsphingosine sulfotransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.8.2.11 ec-2.8.2.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[A-GALACTOSYLCERAMIDE]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[galactosylceramide-sulfate]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10107]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ05785]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18184]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13393]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11525]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14141]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13400]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11352]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13394]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ05173]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20074]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21441]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09270]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7840]], gala-series glycosphingolipids biosynthesis:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16418 16418]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00707 R00707]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
 
−
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
 
−
** [http://www.uniprot.org/uniprot/P09546 P09546]
 
−
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
 
−
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
 
−
** [http://www.uniprot.org/uniprot/O24897 O24897]
 
−
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
 
−
** [http://www.uniprot.org/uniprot/P07275 P07275]
 
−
** [http://www.uniprot.org/uniprot/P10503 P10503]
 
−
** [http://www.uniprot.org/uniprot/P74275 P74275]
 
−
** [http://www.uniprot.org/uniprot/O74766 O74766]
 
−
** [http://www.uniprot.org/uniprot/P95629 P95629]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-pyrroline-5-carboxylate dehydrogenase}}
+
{{#set: common-name=galactosylceramide sulfotransferase|&beta;-galactosyl-n-acylsphingosine sulfotransferase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-2.8.2.11}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=12}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:14, 14 January 2021

Reaction RXN-18301

  • direction:
    • left-to-right
  • common-name:
    • galactosylceramide sulfotransferase
    • β-galactosyl-n-acylsphingosine sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7840, gala-series glycosphingolipids biosynthesis:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-13322&oldid=88300"