Difference between revisions of "PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN"
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(Created page with "Category:reaction == Reaction RXN-1124 == * direction: ** reversible == Reaction formula == * 1 NADPH[c] '''+''' 1 PROTON[c] '''+''' 1 SINAPOYL-COA[c] '''<=>''...") |
(Created page with "Category:reaction == Reaction RXN-7737 == * direction: ** reversible * common-name: ** l,l-diaminopimelate aminotransferase * ec-number: ** [http://enzyme.expasy.org/EC/2....") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN- | + | == Reaction RXN-7737 == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
+ | * common-name: | ||
+ | ** l,l-diaminopimelate aminotransferase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.6.1.83 ec-2.6.1.83] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LL-DIAMINOPIMELATE]][c] '''<=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ20803]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ20802]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5097]], L-lysine biosynthesis VI: | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23991 23991] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07613 R07613] |
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
− | {{#set: nb gene associated= | + | {{#set: common-name=l,l-diaminopimelate aminotransferase}} |
− | {{#set: nb pathway associated= | + | {{#set: ec-number=ec-2.6.1.83}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: nb gene associated=2}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: nb pathway associated=1}} |
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:15, 14 January 2021
Contents
Reaction RXN-7737
- direction:
- reversible
- common-name:
- l,l-diaminopimelate aminotransferase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 LL-DIAMINOPIMELATE[c] <=> 1 DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE[c] + 1 GLT[c] + 1 PROTON[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ20803
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ20802
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5097, L-lysine biosynthesis VI:
- 7 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links