Difference between revisions of "GAPDHSYNEC-RXN"

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(Created page with "Category:reaction == Reaction 6.3.5.6-RXN == * direction: ** left-to-right * common-name: ** anspartyl-trna(asn) amidotransferase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction RXN-14143 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.89 ec-3.1.3.89] == Reaction formula == * 1 DU...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 6.3.5.6-RXN ==
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== Reaction RXN-14143 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** anspartyl-trna(asn) amidotransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.3.5.6 ec-6.3.5.6]
+
** [http://enzyme.expasy.org/EC/3.1.3.89 ec-3.1.3.89]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* 1 [[DUMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DEOXYURIDINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ04587]]
* Gene: [[SJ20233]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ08904]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08903]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05621]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ01848]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ22527]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ18954]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent):
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02102 R02102]
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14514 14514]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29358 29358]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=anspartyl-trna(asn) amidotransferase}}
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{{#set: ec-number=ec-3.1.3.89}}
{{#set: ec-number=ec-6.3.5.6}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=7}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 13:16, 14 January 2021

Reaction RXN-14143

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links