Difference between revisions of "2.1.1.5-RXN"
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(Created page with "Category:reaction == Reaction RXN-14841 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.313 ec-2.4.1.313] == Reaction formula == * 1 CPD...") |
(Created page with "Category:reaction == Reaction 1-PHOSPHATIDYLINOSITOL-KINASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol 4-kinase ** 1-phosphatidylinositol...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction 1-PHOSPHATIDYLINOSITOL-KINASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
+ | * common-name: | ||
+ | ** phosphatidylinositol 4-kinase | ||
+ | ** 1-phosphatidylinositol 4-kinase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.7.1.67 ec-2.7.1.67] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-1108]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ05323]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ15728]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ12598]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ19880]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ21404]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03632]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ20688]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6352]], 3-phosphoinositide biosynthesis: | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: ec-number=ec-2. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19878 19878] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
− | {{#set: nb pathway associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03361 R03361] |
− | {{#set: reconstruction category=annotation}} | + | * UNIPROT: |
− | {{#set: reconstruction tool=pathwaytools}} | + | ** [http://www.uniprot.org/uniprot/P18688 P18688] |
+ | ** [http://www.uniprot.org/uniprot/P12798 P12798] | ||
+ | ** [http://www.uniprot.org/uniprot/P39104 P39104] | ||
+ | ** [http://www.uniprot.org/uniprot/P42356 P42356] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UBF8 Q9UBF8] | ||
+ | ** [http://www.uniprot.org/uniprot/P37297 P37297] | ||
+ | ** [http://www.uniprot.org/uniprot/Q28925 Q28925] | ||
+ | ** [http://www.uniprot.org/uniprot/O81281 O81281] | ||
+ | ** [http://www.uniprot.org/uniprot/O81129 O81129] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZPE1 Q9ZPE1] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=phosphatidylinositol 4-kinase|1-phosphatidylinositol 4-kinase}} | ||
+ | {{#set: ec-number=ec-2.7.1.67}} | ||
+ | {{#set: nb gene associated=7}} | ||
+ | {{#set: nb pathway associated=2}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:20, 14 January 2021
Contents
Reaction 1-PHOSPHATIDYLINOSITOL-KINASE-RXN
- direction:
- left-to-right
- common-name:
- phosphatidylinositol 4-kinase
- 1-phosphatidylinositol 4-kinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 L-1-phosphatidyl-inositols[c] => 1 ADP[c] + 1 CPD-1108[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ05323
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ15728
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ12598
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ19880
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ21404
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03632
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ20688
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
- 4 reactions found over 5 reactions in the full pathway
- PWY-6352, 3-phosphoinositide biosynthesis:
- 5 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: