Difference between revisions of "SJ18760"

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(Created page with "Category:gene == Gene SJ05217 == * transcription-direction: ** positive * right-end-position: ** 60175 * left-end-position: ** 57941 * centisome-position: ** 60.82151...")
(Created page with "Category:gene == Gene SJ01328 == * transcription-direction: ** negative * right-end-position: ** 149838 * left-end-position: ** 149359 * centisome-position: ** 97.80116...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05217 ==
+
== Gene SJ01328 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 60175
+
** 149838
 
* left-end-position:
 
* left-end-position:
−
** 57941
+
** 149359
 
* centisome-position:
 
* centisome-position:
−
** 60.82151    
+
** 97.80116    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.26.4-RXN]]
−
* [[3.1.3.16-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[MRNA-GUANYLYLTRANSFERASE-RXN]]
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=149838}}
−
* [[POLYNUCLEOTIDE-5-PHOSPHATASE-RXN]]
+
{{#set: left-end-position=149359}}
−
** Category: [[annotation]]
+
{{#set: centisome-position=97.80116   }}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7375]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=60175}}
 
−
{{#set: left-end-position=57941}}
 
−
{{#set: centisome-position=60.82151   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=1}}
 

Revision as of 18:42, 14 January 2021

Gene SJ01328

  • transcription-direction:
    • negative
  • right-end-position:
    • 149838
  • left-end-position:
    • 149359
  • centisome-position:
    • 97.80116

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18760&oldid=92722"