Difference between revisions of "SJ21345"

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(Created page with "Category:gene == Gene SJ15468 == * transcription-direction: ** positive * right-end-position: ** 55097 * left-end-position: ** 52617 * centisome-position: ** 17.805489...")
(Created page with "Category:gene == Gene SJ05828 == * transcription-direction: ** positive * right-end-position: ** 346790 * left-end-position: ** 327336 * centisome-position: ** 67.3384...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15468 ==
+
== Gene SJ05828 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 55097
+
** 346790
 
* left-end-position:
 
* left-end-position:
−
** 52617
+
** 327336
 
* centisome-position:
 
* centisome-position:
−
** 17.805489    
+
** 67.3384    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-15559]]
−
* [[4.3.1.17-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[5.1.1.18-RXN]]
+
* [[RXN-15560]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[AMINO-ACID-RACEMASE-RXN]]
+
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DSERDEAM-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15125]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15581]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-2381]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-2382]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[TRYPSYN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6196]]
+
* [[PWY-7511]]
−
** '''2''' reactions found over '''1''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6455]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[SERDEG-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-3661]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[PWY0-1535]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6949]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[TRPSYN-PWY]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=55097}}
+
{{#set: right-end-position=346790}}
−
{{#set: left-end-position=52617}}
+
{{#set: left-end-position=327336}}
−
{{#set: centisome-position=17.805489   }}
+
{{#set: centisome-position=67.3384   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=1}}

Revision as of 18:49, 14 January 2021

Gene SJ05828

  • transcription-direction:
    • positive
  • right-end-position:
    • 346790
  • left-end-position:
    • 327336
  • centisome-position:
    • 67.3384

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21345&oldid=95855"