Difference between revisions of "SJ08046"
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(Created page with "Category:gene == Gene SJ00670 == * transcription-direction: ** negative * right-end-position: ** 161545 * left-end-position: ** 157778 * centisome-position: ** 96.32591...") |
(Created page with "Category:gene == Gene SJ05219 == * transcription-direction: ** positive * right-end-position: ** 92228 * left-end-position: ** 77297 * centisome-position: ** 81.13978...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ05219 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 92228 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 77297 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 81.13978 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[RXN- | + | * [[RXN-11190]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | {{#set: transcription-direction= | + | * [[SPERMIDINESYN-RXN]] |
− | {{#set: right-end-position= | + | ** Category: [[annotation]] |
− | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: centisome-position= | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[SPERMINE-SYNTHASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | * [[BSUBPOLYAMSYN-PWY]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[ARGSPECAT-PWY]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[POLYAMINSYN3-PWY]] | ||
+ | ** '''4''' reactions found over '''1''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=92228}} | ||
+ | {{#set: left-end-position=77297}} | ||
+ | {{#set: centisome-position=81.13978 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
+ | {{#set: nb pathway associated=3}} |
Revision as of 18:51, 14 January 2021
Contents
Gene SJ05219
- transcription-direction:
- positive
- right-end-position:
- 92228
- left-end-position:
- 77297
- centisome-position:
- 81.13978
Organism(s) associated with this gene
Reaction(s) associated
- RXN-11190
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- SPERMIDINESYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SPERMINE-SYNTHASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- BSUBPOLYAMSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- ARGSPECAT-PWY
- 2 reactions found over 2 reactions in the full pathway
- POLYAMINSYN3-PWY
- 4 reactions found over 1 reactions in the full pathway