Difference between revisions of "SJ12394"

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(Created page with "Category:gene == Gene SJ16156 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 3PGAREARR-RXN ** Categ...")
(Created page with "Category:gene == Gene SJ07706 == * transcription-direction: ** positive * right-end-position: ** 42505 * left-end-position: ** 7827 * centisome-position: ** 12.470127...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16156 ==
+
== Gene SJ07706 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 42505
 +
* left-end-position:
 +
** 7827
 +
* centisome-position:
 +
** 12.470127   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3PGAREARR-RXN]]
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* [[PROTEIN-KINASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-8443]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-5381]]
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* [[PWY-6142]]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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** '''10''' reactions found over '''13''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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* [[PWY-7003]]
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{{#set: right-end-position=42505}}
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** '''8''' reactions found over '''6''' reactions in the full pathway
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{{#set: left-end-position=7827}}
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* [[PWY-7218]]
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{{#set: centisome-position=12.470127    }}
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** '''7''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P341-PWY]]
 
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** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5723]]
 
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** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P124-PWY]]
 
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** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-2221]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
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** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
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** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
</div>
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=1}}

Revision as of 18:51, 14 January 2021

Gene SJ07706

  • transcription-direction:
    • positive
  • right-end-position:
    • 42505
  • left-end-position:
    • 7827
  • centisome-position:
    • 12.470127

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12394&oldid=97289"