Difference between revisions of "ExchangeSeed-EDTA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOKIN-RXN GLUCONOKIN-RXN] == * direction: ** left-to-right * common-name: ** d-gluconate kinas...")
 
(Created page with "Category:reaction == Reaction ExchangeSeed-EDTA == * direction: ** reversible == Reaction formula == * 1.0 EDTA[C-BOUNDARY] '''<=>''' 1.0 EDTA[e] == Gene(s) associ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOKIN-RXN GLUCONOKIN-RXN] ==
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== Reaction ExchangeSeed-EDTA ==
 
* direction:
 
* direction:
** left-to-right
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** reversible
* common-name:
 
** d-gluconate kinase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.7.1.12 ec-2.7.1.12]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[GLUCONATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-2961]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[EDTA]][C-BOUNDARY] '''<=>''' 1.0 [[EDTA]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ14827]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5530]], sorbitol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5530 PWY-5530]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[IDNCAT-PWY]], L-idonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=IDNCAT-PWY IDNCAT-PWY]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[GLUCONSUPER-PWY]], D-gluconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONSUPER-PWY GLUCONSUPER-PWY]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19434 19434]
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{{#set: nb gene associated=0}}
* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
** [http://www.genome.jp/dbget-bin/www_bget?R01737 R01737]
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{{#set: reconstruction category=manual}}
* UNIPROT:
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{{#set: reconstruction tool=curation}}
** [http://www.uniprot.org/uniprot/P12011 P12011]
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
** [http://www.uniprot.org/uniprot/Q9JRF7 Q9JRF7]
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{{#set: reconstruction source=import_from_medium}}
** [http://www.uniprot.org/uniprot/Q8X6W0 Q8X6W0]
 
** [http://www.uniprot.org/uniprot/Q9CDN5 Q9CDN5]
 
** [http://www.uniprot.org/uniprot/P39208 P39208]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=d-gluconate kinase}}
 
{{#set: ec-number=ec-2.7.1.12}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-EDTA

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links