Difference between revisions of "6PGLUCONOLACT-RXN"
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(Created page with "Category:reaction == Reaction RXN-14276 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119] == Reaction formula == * 1 ...") |
(Created page with "Category:reaction == Reaction 6PGLUCONOLACT-RXN == * direction: ** left-to-right * common-name: ** 6-phosphogluconolactonase * ec-number: ** [http://enzyme.expasy.org/EC/3...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction 6PGLUCONOLACT-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** 6-phosphogluconolactonase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.1.1.31 ec-3.1.1.31] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-2961]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ07027]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ10585]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[GLYCOLYSIS-E-D]], superpathway of glycolysis and the Entner-Doudoroff pathway: |
− | ** ''' | + | ** '''4''' reactions found over '''2''' reactions in the full pathway |
+ | * [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[RUMP-PWY]], formaldehyde oxidation I: | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[P122-PWY]], heterolactic fermentation: | ||
+ | ** '''16''' reactions found over '''18''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR102539 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12557 12557] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P63337 P63337] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: ec-number=ec- | + | {{#set: common-name=6-phosphogluconolactonase}} |
+ | {{#set: ec-number=ec-3.1.1.31}} | ||
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:22, 18 March 2021
Contents
Reaction 6PGLUCONOLACT-RXN
- direction:
- left-to-right
- common-name:
- 6-phosphogluconolactonase
- ec-number:
Reaction formula
- 1 D-6-P-GLUCONO-DELTA-LACTONE[c] + 1 WATER[c] => 1 CPD-2961[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ07027
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ10585
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- GLYCOLYSIS-E-D, superpathway of glycolysis and the Entner-Doudoroff pathway:
- 4 reactions found over 2 reactions in the full pathway
- OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch) I:
- 3 reactions found over 3 reactions in the full pathway
- RUMP-PWY, formaldehyde oxidation I:
- 4 reactions found over 6 reactions in the full pathway
- P122-PWY, heterolactic fermentation:
- 16 reactions found over 18 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links