Difference between revisions of "SJ15629"

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(Created page with "Category:gene == Gene SJ11348 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
(Created page with "Category:gene == Gene SJ15629 == * transcription-direction: ** positive * right-end-position: ** 173239 * left-end-position: ** 165127 * centisome-position: ** 56.331192...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11348 ==
+
== Gene SJ15629 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 173239
 +
* left-end-position:
 +
** 165127
 +
* centisome-position:
 +
** 56.331192   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PEROXID-RXN]]
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* [[1.14.13.78-RXN]]
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** Category: [[annotation]]
−
** Category: [[orthology]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-14240]]
−
* [[RXN-1121]]
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** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-15288]]
−
* [[RXN-12510]]
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** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-17352]]
−
* [[RXN-3661]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-8635]]
−
* [[RXN-5242]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7580]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7651]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5047]]
+
* [[PWY-7214]]
−
** '''6''' reactions found over '''15''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5034]]
+
* [[PWY-7445]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-2181]]
+
* [[PWY-5466]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-3101]]
+
* [[PWY-6824]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5640]]
+
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5060]]
+
{{#set: transcription-direction=positive}}
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=173239}}
−
* [[PWY1F-467]]
+
{{#set: left-end-position=165127}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=56.331192    }}
−
* [[PWY-1121]]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ15629

  • transcription-direction:
    • positive
  • right-end-position:
    • 173239
  • left-end-position:
    • 165127
  • centisome-position:
    • 56.331192

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15629&oldid=133271"