Difference between revisions of "SJ20094"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ07699 == * transcription-direction: ** positive * right-end-position: ** 36626 * left-end-position: ** 30440 * centisome-position: ** 48.318993...")
(Created page with "Category:gene == Gene SJ20094 == * transcription-direction: ** negative * right-end-position: ** 50716 * left-end-position: ** 39507 * centisome-position: ** 18.487997...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07699 ==
+
== Gene SJ20094 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 36626
+
** 50716
 
* left-end-position:
 
* left-end-position:
−
** 30440
+
** 39507
 
* centisome-position:
 
* centisome-position:
−
** 48.318993    
+
** 18.487997    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[QUERCETIN-3-O-METHYLTRANSFERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[GSHTRAN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-1104]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[GST-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PEROXID-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13673]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-1143]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13935]]
+
* [[RXN-15288]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-3422]]
+
* [[RXN-15680]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6064]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6842]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4061]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7112]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7214]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7161]]
+
* [[PWY-7445]]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-2181]]
+
* [[PWY-7533]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7498]]
+
* [[PWY-5466]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6824]]
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7186]]
+
* [[PWY-5469]]
−
** '''2''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-1121]]
+
* [[PWY-5461]]
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-361]]
+
</div>
−
** '''7''' reactions found over '''15''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-5168]]
+
{{#set: right-end-position=50716}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=39507}}
−
* [[PWY-7163]]
+
{{#set: centisome-position=18.487997   }}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=36626}}
 
−
{{#set: left-end-position=30440}}
 
−
{{#set: centisome-position=48.318993   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=10}}

Latest revision as of 11:09, 18 March 2021

Gene SJ20094

  • transcription-direction:
    • negative
  • right-end-position:
    • 50716
  • left-end-position:
    • 39507
  • centisome-position:
    • 18.487997

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20094&oldid=136086"