Difference between revisions of "RXN-17518"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12590 RXN-12590] == * direction: ** left-to-right * common-name: ** pyridoxal 5′-phosphat...")
 
(Created page with "Category:reaction == Reaction RXN-17518 == * direction: ** left-to-right * common-name: ** coproporphyrin ferrochelatase * ec-number: ** [http://enzyme.expasy.org/EC/4.99....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12590 RXN-12590] ==
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== Reaction RXN-17518 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** pyridoxal 5′-phosphate synthase (glutamine hydrolyzing)
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** coproporphyrin ferrochelatase
** pyridoxal 5'-phosphate synthase
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* ec-number:
* synonymous:
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** [http://enzyme.expasy.org/EC/4.99.1.9 ec-4.99.1.9]
** pdxst
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[AMMONIUM]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[RIBOSE-5P]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[Pi]][c] '''+''' 4 [[WATER]][c]
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* 1 [[COPROPORPHYRIN_III]][c] '''+''' 1 [[FE+2]][c] '''=>''' 1 [[CPD-17070]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10267]]
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* Gene: [[SJ19310]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19163]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7766]], heme b biosynthesis IV (Gram-positive bacteria):
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R10088 R10088]
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** [http://www.genome.jp/dbget-bin/www_bget?R11329 R11329]
* RHEA:
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* METANETX-RXN : MNXR114626
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26408 26408]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=pyridoxal 5'-phosphate synthase|pyridoxal 5′-phosphate synthase (glutamine hydrolyzing)}}
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{{#set: common-name=coproporphyrin ferrochelatase}}
{{#set: synonymous=pdxst}}
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{{#set: ec-number=ec-4.99.1.9}}
{{#set: nb gene associated=2}}
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{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
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{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-17518

  • direction:
    • left-to-right
  • common-name:
    • coproporphyrin ferrochelatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7766, heme b biosynthesis IV (Gram-positive bacteria):
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR114626