Difference between revisions of "RXN-17114"

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(Created page with "Category:reaction == Reaction 3.6.3.9-RXN == * direction: ** left-to-right * common-name: ** sodium:potassium-exchanging atpase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction RXN-17114 == * direction: ** left-to-right * common-name: ** (2e,6z,9z,12z,15z,18z)-tetracosahexaenoyl-coa hydratase ** enoyl-coa hydratase *...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.6.3.9-RXN ==
+
== Reaction RXN-17114 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** sodium:potassium-exchanging atpase
+
** (2e,6z,9z,12z,15z,18z)-tetracosahexaenoyl-coa hydratase
 +
** enoyl-coa hydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.3.9 ec-3.6.3.9]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 2 [[K+]][e] '''+''' 3 [[NA+]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 2 [[K+]][c] '''+''' 3 [[NA+]][e] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-18492]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-18493]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05555]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ10275]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ09035]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03584]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ08886]]
+
* Gene: [[SJ03913]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
 +
** '''8''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR120666
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18354 18354]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O43134 O43134]
 
−
** [http://www.uniprot.org/uniprot/Q7M3H6 Q7M3H6]
 
−
** [http://www.uniprot.org/uniprot/P05023 P05023]
 
−
** [http://www.uniprot.org/uniprot/P06685 P06685]
 
−
** [http://www.uniprot.org/uniprot/P05027 P05027]
 
−
** [http://www.uniprot.org/uniprot/P05028 P05028]
 
−
** [http://www.uniprot.org/uniprot/P54707 P54707]
 
−
** [http://www.uniprot.org/uniprot/P09572 P09572]
 
−
** [http://www.uniprot.org/uniprot/P13638 P13638]
 
−
** [http://www.uniprot.org/uniprot/P05029 P05029]
 
−
** [http://www.uniprot.org/uniprot/P50993 P50993]
 
−
** [http://www.uniprot.org/uniprot/P24797 P24797]
 
−
** [http://www.uniprot.org/uniprot/P21188 P21188]
 
−
** [http://www.uniprot.org/uniprot/Q64608 Q64608]
 
−
** [http://www.uniprot.org/uniprot/Q04680 Q04680]
 
−
** [http://www.uniprot.org/uniprot/Q9PSP6 Q9PSP6]
 
−
** [http://www.uniprot.org/uniprot/Q27766 Q27766]
 
−
** [http://www.uniprot.org/uniprot/Q9PS52 Q9PS52]
 
−
** [http://www.uniprot.org/uniprot/Q9PS72 Q9PS72]
 
−
** [http://www.uniprot.org/uniprot/Q92123 Q92123]
 
−
** [http://www.uniprot.org/uniprot/Q7M3H7 Q7M3H7]
 
−
** [http://www.uniprot.org/uniprot/P06686 P06686]
 
−
** [http://www.uniprot.org/uniprot/P05024 P05024]
 
−
** [http://www.uniprot.org/uniprot/P14415 P14415]
 
−
** [http://www.uniprot.org/uniprot/P24798 P24798]
 
−
** [http://www.uniprot.org/uniprot/P30715 P30715]
 
−
** [http://www.uniprot.org/uniprot/Q04679 Q04679]
 
−
** [http://www.uniprot.org/uniprot/Q91580 Q91580]
 
−
** [http://www.uniprot.org/uniprot/P06687 P06687]
 
−
** [http://www.uniprot.org/uniprot/P20648 P20648]
 
−
** [http://www.uniprot.org/uniprot/Q13818 Q13818]
 
−
** [http://www.uniprot.org/uniprot/P30716 P30716]
 
−
** [http://www.uniprot.org/uniprot/Q04646 Q04646]
 
−
** [http://www.uniprot.org/uniprot/Q04645 Q04645]
 
−
** [http://www.uniprot.org/uniprot/Q28887 Q28887]
 
−
** [http://www.uniprot.org/uniprot/P28774 P28774]
 
−
** [http://www.uniprot.org/uniprot/P25489 P25489]
 
−
** [http://www.uniprot.org/uniprot/P06583 P06583]
 
−
** [http://www.uniprot.org/uniprot/P05026 P05026]
 
−
** [http://www.uniprot.org/uniprot/P07340 P07340]
 
−
** [http://www.uniprot.org/uniprot/P04074 P04074]
 
−
** [http://www.uniprot.org/uniprot/P05025 P05025]
 
−
** [http://www.uniprot.org/uniprot/P13637 P13637]
 
−
** [http://www.uniprot.org/uniprot/P13607 P13607]
 
−
** [http://www.uniprot.org/uniprot/P18907 P18907]
 
−
** [http://www.uniprot.org/uniprot/P17326 P17326]
 
−
** [http://www.uniprot.org/uniprot/P14094 P14094]
 
−
** [http://www.uniprot.org/uniprot/P30714 P30714]
 
−
** [http://www.uniprot.org/uniprot/Q7M0G4 Q7M0G4]
 
−
** [http://www.uniprot.org/uniprot/P51165 P51165]
 
−
** [http://www.uniprot.org/uniprot/Q92030 Q92030]
 
−
** [http://www.uniprot.org/uniprot/O45240 O45240]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=sodium:potassium-exchanging atpase}}
+
{{#set: common-name=(2e,6z,9z,12z,15z,18z)-tetracosahexaenoyl-coa hydratase|enoyl-coa hydratase}}
−
{{#set: ec-number=ec-3.6.3.9}}
+
{{#set: ec-number=ec-4.2.1.17}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-17114

  • direction:
    • left-to-right
  • common-name:
    • (2e,6z,9z,12z,15z,18z)-tetracosahexaenoyl-coa hydratase
    • enoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
    • 8 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR120666





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