Difference between revisions of "PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN"
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(Created page with "Category:reaction == Reaction RXN-5470 == * direction: ** left-to-right * common-name: ** (mannosyl)9-(n-acetylglucosaminyl)2-diphosphodolichol glucosyltransferase ** doli...") |
(Created page with "Category:reaction == Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN == * direction: ** reversible * common-name: ** pyruvate phosphate dikinase * ec-number: ** [http://enzym...") |
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(One intermediate revision by one other user not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** pyruvate phosphate dikinase |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.7.9.1 ec-2.7.9.1] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ06759]] |
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: |
− | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
+ | * [[PWY-6549]], L-glutamine biosynthesis III: | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: | ||
+ | ** '''10''' reactions found over '''14''' reactions in the full pathway | ||
+ | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR103107 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10756 10756] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00206 R00206] |
− | * | + | * UNIPROT: |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/Q7M0I6 Q7M0I6] |
− | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/O23404 O23404] |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/Q9WYA9 Q9WYA9] |
− | {{#set: ec-number=ec-2. | + | ** [http://www.uniprot.org/uniprot/P22983 P22983] |
− | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/Q41846 Q41846] |
− | {{#set: nb pathway associated= | + | ** [http://www.uniprot.org/uniprot/Q42367 Q42367] |
− | {{#set: reconstruction category=annotation}} | + | ** [http://www.uniprot.org/uniprot/Q42368 Q42368] |
− | {{#set: reconstruction tool=pathwaytools}} | + | ** [http://www.uniprot.org/uniprot/P22221 P22221] |
+ | ** [http://www.uniprot.org/uniprot/P37213 P37213] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42736 Q42736] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42910 Q42910] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39734 Q39734] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39735 Q39735] | ||
+ | ** [http://www.uniprot.org/uniprot/O24612 O24612] | ||
+ | ** [http://www.uniprot.org/uniprot/O85840 O85840] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=pyruvate phosphate dikinase}} | ||
+ | {{#set: ec-number=ec-2.7.9.1}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=4}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:19, 18 March 2021
Contents
Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN
- direction:
- reversible
- common-name:
- pyruvate phosphate dikinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 PYRUVATE[c] + 1 Pi[c] <=> 1 AMP[c] + 1 PHOSPHO-ENOL-PYRUVATE[c] + 1 PPI[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ06759
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type:
- 5 reactions found over 7 reactions in the full pathway
- PWY-6549, L-glutamine biosynthesis III:
- 8 reactions found over 9 reactions in the full pathway
- PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
- 10 reactions found over 14 reactions in the full pathway
- PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
- 9 reactions found over 11 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links