Difference between revisions of "2.4.1.101-RXN"
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(Created page with "Category:reaction == Reaction AAL_LPAREN_fum_RPAREN_ == * direction: ** left-to-right * common-name: ** n6-(1,2-dicarboxyethyl)amp amp-lyase (fumarate-forming) == Reaction...") |
(Created page with "Category:reaction == Reaction 2.4.1.101-RXN == * direction: ** left-to-right * common-name: ** alpha-1,3-mannosyl-glycoprotein 2-beta-n-acetylglucosaminyltransferase * ec-...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction 2.4.1.101-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** alpha-1,3-mannosyl-glycoprotein 2-beta-n-acetylglucosaminyltransferase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.4.1.101 ec-2.4.1.101] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[Mannosyl5-N-Glycans]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[Mannosyl5-N-acetyl-glucosamine2-R]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ19827]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
+ | * Gene: [[SJ05137]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-7426]], complex N-linked glycan biosynthesis (vertebrates): | ||
+ | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-7920]], complex N-linked glycan biosynthesis (plants): | ||
+ | ** '''2''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR115084 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11457 11457] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P27115 P27115] | ||
+ | ** [http://www.uniprot.org/uniprot/P27808 P27808] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09325 Q09325] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9XGM8 Q9XGM8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q21450 Q21450] | ||
+ | ** [http://www.uniprot.org/uniprot/Q11068 Q11068] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9GPA3 Q9GPA3] | ||
+ | ** [http://www.uniprot.org/uniprot/P26572 P26572] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=alpha-1,3-mannosyl-glycoprotein 2-beta-n-acetylglucosaminyltransferase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.4.1.101}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=2}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction category=orthology|annotation}} |
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:23, 18 March 2021
Contents
Reaction 2.4.1.101-RXN
- direction:
- left-to-right
- common-name:
- alpha-1,3-mannosyl-glycoprotein 2-beta-n-acetylglucosaminyltransferase
- ec-number:
Reaction formula
- 1 Mannosyl5-N-Glycans[c] + 1 UDP-N-ACETYL-D-GLUCOSAMINE[c] => 1 Mannosyl5-N-acetyl-glucosamine2-R[c] + 1 PROTON[c] + 1 UDP[c]
Gene(s) associated with this reaction
- Gene: SJ19827
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ05137
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7426, complex N-linked glycan biosynthesis (vertebrates):
- 4 reactions found over 10 reactions in the full pathway
- PWY-7920, complex N-linked glycan biosynthesis (plants):
- 2 reactions found over 11 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR115084
- RHEA:
- UNIPROT: