Difference between revisions of "RXN-11737"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GSAAMINOTRANS-RXN == * direction: ** left-to-right * common-name: ** glutamate-1-semialdehyde aminotransferase * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction RXN-11737 == * direction: ** reversible * common-name: ** cysteate aminotransferase ** l-phenylalanine:2-oxoglutarate aminotransferase * ec-n...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GSAAMINOTRANS-RXN ==
+
== Reaction RXN-11737 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** glutamate-1-semialdehyde aminotransferase
+
** cysteate aminotransferase
 +
** l-phenylalanine:2-oxoglutarate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13978]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ04188]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05778]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08678]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07646]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 17: Line 30:
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20943]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
+
* [[PWY-6643]], coenzyme M biosynthesis II:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6638]], sulfolactate degradation III:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6642]], (R)-cysteate degradation:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR95161
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P18492 P18492]
+
{{#set: common-name=cysteate aminotransferase|l-phenylalanine:2-oxoglutarate aminotransferase}}
−
** [http://www.uniprot.org/uniprot/P21267 P21267]
+
{{#set: ec-number=ec-2.6.1.1}}
−
** [http://www.uniprot.org/uniprot/Q06741 Q06741]
+
{{#set: nb gene associated=5}}
−
** [http://www.uniprot.org/uniprot/Q06774 Q06774]
+
{{#set: nb pathway associated=3}}
−
** [http://www.uniprot.org/uniprot/P23893 P23893]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/O26330 O26330]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P30949 P30949]
 
−
** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
 
−
** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
 
−
** [http://www.uniprot.org/uniprot/O29027 O29027]
 
−
** [http://www.uniprot.org/uniprot/P45621 P45621]
 
−
** [http://www.uniprot.org/uniprot/P24630 P24630]
 
−
** [http://www.uniprot.org/uniprot/P31593 P31593]
 
−
** [http://www.uniprot.org/uniprot/Q39566 Q39566]
 
−
** [http://www.uniprot.org/uniprot/P48247 P48247]
 
−
** [http://www.uniprot.org/uniprot/P46716 P46716]
 
−
** [http://www.uniprot.org/uniprot/Q40147 Q40147]
 
−
** [http://www.uniprot.org/uniprot/O74061 O74061]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=glutamate-1-semialdehyde aminotransferase}}
 
−
{{#set: ec-number=ec-5.4.3.8}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-11737

  • direction:
    • reversible
  • common-name:
    • cysteate aminotransferase
    • l-phenylalanine:2-oxoglutarate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6643, coenzyme M biosynthesis II:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6638, sulfolactate degradation III:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6642, (R)-cysteate degradation:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95161
  • LIGAND-RXN:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-11737&oldid=142295"