Difference between revisions of "SJ15413"

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(Created page with "Category:gene == Gene SJ02713 == * transcription-direction: ** positive * right-end-position: ** 46127 * left-end-position: ** 26609 * centisome-position: ** 4.979965...")
(Created page with "Category:gene == Gene SJ15413 == * transcription-direction: ** positive * right-end-position: ** 282221 * left-end-position: ** 274065 * centisome-position: ** 92.47580...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02713 ==
+
== Gene SJ15413 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 46127
+
** 282221
 
* left-end-position:
 
* left-end-position:
−
** 26609
+
** 274065
 
* centisome-position:
 
* centisome-position:
−
** 4.979965    
+
** 92.47580    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
−
* [[1.1.1.145-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12693]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12747]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12789]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-1882]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN66-342]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-350]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-353]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6946]]
+
* [[PWY-7159]]
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6944]]
+
* [[CHLOROPHYLL-SYN]]
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6948]]
+
* [[PWY-5531]]
−
** '''2''' reactions found over '''18''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5115]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY4FS-13]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY4FS-12]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-882]]
 
−
** '''6''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY66-378]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7299]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=46127}}
+
{{#set: right-end-position=282221}}
−
{{#set: left-end-position=26609}}
+
{{#set: left-end-position=274065}}
−
{{#set: centisome-position=4.979965   }}
+
{{#set: centisome-position=92.47580   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:00, 18 March 2021

Gene SJ15413

  • transcription-direction:
    • positive
  • right-end-position:
    • 282221
  • left-end-position:
    • 274065
  • centisome-position:
    • 92.47580

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7159
    • 5 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-5531
    • 4 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15413&oldid=131677"