Difference between revisions of "SJ04334"
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(Created page with "Category:gene == Gene SJ01912 == * transcription-direction: ** negative * right-end-position: ** 334953 * left-end-position: ** 324801 * centisome-position: ** 59.310627...") |
(Created page with "Category:gene == Gene SJ04334 == * transcription-direction: ** negative * right-end-position: ** 692094 * left-end-position: ** 678256 * centisome-position: ** 69.69546...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ04334 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 692094 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 678256 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 69.69546 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * [[ | + | * [[ACYLCOADEHYDROG-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-17775]] |
− | ** Category: [[ | + | ** Category: [[orthology]] |
− | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
+ | * [[RXN-17779]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-17783]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-17784]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-17788]] |
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-17792]] |
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-17796]] |
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | * [[FAO-PWY]] |
− | + | ** '''6''' reactions found over '''7''' reactions in the full pathway | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | ** ''' | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=692094}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=678256}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=69.69546 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=9}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
Latest revision as of 11:01, 18 March 2021
Contents
Gene SJ04334
- transcription-direction:
- negative
- right-end-position:
- 692094
- left-end-position:
- 678256
- centisome-position:
- 69.69546
Organism(s) associated with this gene
Reaction(s) associated
- ACYLCOADEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-17775
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-17779
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-17783
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-17784
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-17788
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-17792
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-17796
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- FAO-PWY
- 6 reactions found over 7 reactions in the full pathway