Difference between revisions of "SJ16279"

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(Created page with "Category:gene == Gene SJ11615 == * transcription-direction: ** negative * right-end-position: ** 226669 * left-end-position: ** 220341 * centisome-position: ** 28.2715...")
(Created page with "Category:gene == Gene SJ16279 == * transcription-direction: ** positive * right-end-position: ** 5692 * left-end-position: ** 145 * centisome-position: ** 2.5283349 ==...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11615 ==
+
== Gene SJ16279 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 226669
+
** 5692
 
* left-end-position:
 
* left-end-position:
−
** 220341
+
** 145
 
* centisome-position:
 
* centisome-position:
−
** 28.2715    
+
** 2.5283349    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SUPEROX-DISMUT-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[6.3.5.7-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[AMIDASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PYRAZIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[R311-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14727]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14728]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17608]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNN-404]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[DETOX1-PWY]]
+
* [[PWY-5921]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARGDEG-V-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7308]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5025]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3161]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[DETOX1-PWY-1]]
+
* [[PWY-581]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-6854]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=5692}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=145}}
−
{{#set: right-end-position=226669}}
+
{{#set: centisome-position=2.5283349   }}
−
{{#set: left-end-position=220341}}
 
−
{{#set: centisome-position=28.2715   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ16279

  • transcription-direction:
    • positive
  • right-end-position:
    • 5692
  • left-end-position:
    • 145
  • centisome-position:
    • 2.5283349

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5921
    • 2 reactions found over 4 reactions in the full pathway
  • ARGDEG-V-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7308
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5025
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3161
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-581
    • 5 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16279&oldid=133399"