Difference between revisions of "SJ22556"

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(Created page with "Category:gene == Gene SJ17585 == * transcription-direction: ** negative * right-end-position: ** 193956 * left-end-position: ** 181236 * centisome-position: ** 70.04047...")
(Created page with "Category:gene == Gene SJ22556 == * transcription-direction: ** negative * right-end-position: ** 66802 * left-end-position: ** 60258 * centisome-position: ** 34.757076...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17585 ==
+
== Gene SJ22556 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 193956
+
** 66802
 
* left-end-position:
 
* left-end-position:
−
** 181236
+
** 60258
 
* centisome-position:
 
* centisome-position:
−
** 70.04047    
+
** 34.757076    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DTDPDEHYDRHAMEPIM-RXN]]
−
* [[PEPDEPHOS-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[DTDPDEHYRHAMREDUCT-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14117]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14192]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14207]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DTDPRHAMSYN-PWY]]
−
* [[PWY-2221]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7301]]
−
* [[PWY-7383]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7814]]
−
* [[PWY-6901]]
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[NPGLUCAT-PWY]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P124-PWY]]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P341-PWY]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7218]]
 
−
** '''7''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5723]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=193956}}
+
{{#set: right-end-position=66802}}
−
{{#set: left-end-position=181236}}
+
{{#set: left-end-position=60258}}
−
{{#set: centisome-position=70.04047   }}
+
{{#set: centisome-position=34.757076   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=17}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:04, 18 March 2021

Gene SJ22556

  • transcription-direction:
    • negative
  • right-end-position:
    • 66802
  • left-end-position:
    • 60258
  • centisome-position:
    • 34.757076

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • DTDPRHAMSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7301
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7814
    • 2 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22556&oldid=133475"