Difference between revisions of "SJ02097"

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(Created page with "Category:gene == Gene SJ15937 == * transcription-direction: ** negative * right-end-position: ** 97175 * left-end-position: ** 85900 * centisome-position: ** 29.683023...")
(Created page with "Category:gene == Gene SJ02097 == * transcription-direction: ** positive * right-end-position: ** 260196 * left-end-position: ** 226837 * centisome-position: ** 41.735188...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ15937 ==
+
== Gene SJ02097 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 97175
+
** 260196
 
* left-end-position:
 
* left-end-position:
** 85900
+
** 226837
 
* centisome-position:
 
* centisome-position:
** 29.683023    
+
** 41.735188    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DISULFOXRED-RXN]]
* [[ACSERLY-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-982]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[NITRITE-REDUCTASE-CYTOCHROME-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12726]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15838]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[SULFOCYS-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-4202]]
* [[CYSTSYN-PWY]]
+
** '''4''' reactions found over '''6''' reactions in the full pathway
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-4621]]
* [[HOMOCYSDEGR-PWY]]
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
* [[PWY-I9]]
+
{{#set: transcription-direction=positive}}
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=260196}}
* [[PWY-801]]
+
{{#set: left-end-position=226837}}
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=41.735188   }}
* [[P303-PWY]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6748]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6523]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7084]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6936]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[DENITRIFICATION-PWY]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7870]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=97175}}
 
{{#set: left-end-position=85900}}
 
{{#set: centisome-position=29.683023   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:04, 18 March 2021

Gene SJ02097

  • transcription-direction:
    • positive
  • right-end-position:
    • 260196
  • left-end-position:
    • 226837
  • centisome-position:
    • 41.735188

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4202
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-4621
    • 2 reactions found over 2 reactions in the full pathway