Difference between revisions of "SJ03668"
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(Created page with "Category:gene == Gene SJ14972 == * transcription-direction: ** positive * right-end-position: ** 288653 * left-end-position: ** 284576 * centisome-position: ** 93.57759...") |
(Created page with "Category:gene == Gene SJ03668 == * transcription-direction: ** negative * right-end-position: ** 491696 * left-end-position: ** 477233 * centisome-position: ** 91.47003...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ03668 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 491696 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 477233 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 91.47003 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[GLYOHMETRANS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
− | {{#set: right-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | {{#set: left-end-position= | + | * [[RXN0-5234]] |
− | {{#set: centisome-position= | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[1CMET2-PWY]] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5497]] | ||
+ | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
+ | * [[PWY-181]] | ||
+ | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-3661]] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-2201]] | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[GLYSYN-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-3661-1]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-1622]] | ||
+ | ** '''6''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-3841]] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-2161]] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=491696}} | ||
+ | {{#set: left-end-position=477233}} | ||
+ | {{#set: centisome-position=91.47003 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
+ | {{#set: nb pathway associated=10}} |
Latest revision as of 11:06, 18 March 2021
Contents
Gene SJ03668
- transcription-direction:
- negative
- right-end-position:
- 491696
- left-end-position:
- 477233
- centisome-position:
- 91.47003
Organism(s) associated with this gene
Reaction(s) associated
- GLYOHMETRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-5234
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- 1CMET2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- PWY-181
- 5 reactions found over 9 reactions in the full pathway
- PWY-3661
- 3 reactions found over 7 reactions in the full pathway
- PWY-2201
- 9 reactions found over 10 reactions in the full pathway
- GLYSYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-3661-1
- 2 reactions found over 4 reactions in the full pathway
- PWY-1622
- 6 reactions found over 13 reactions in the full pathway
- PWY-3841
- 9 reactions found over 11 reactions in the full pathway
- PWY-2161
- 5 reactions found over 5 reactions in the full pathway