Difference between revisions of "RXN-11481"

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(Created page with "Category:reaction == Reaction RXN0-2044 == * direction: ** reversible * common-name: ** 3-hydroxyadipyl-coa dehydrogenase ** 3-hydroxyacyl-coa dehydrogenase * ec-number: *...")
(Created page with "Category:reaction == Reaction RXN-11481 == * direction: ** left-to-right * common-name: ** 3-hydroxypimeloyl-[acp] methyl ester dehydratase * ec-number: ** [http://enzyme....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-2044 ==
+
== Reaction RXN-11481 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-hydroxyadipyl-coa dehydrogenase
+
** 3-hydroxypimeloyl-[acp] methyl ester dehydratase
−
** 3-hydroxyacyl-coa dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
+
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-HYDROXYADIPYL-COA]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-KETO-ADIPYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''=>''' 1 [[Enoylpimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ10275]]
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* Gene: [[SJ17348]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01444]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ07211]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06127]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ16180]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21390]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03584]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16470]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-321]], phenylacetate degradation I (aerobic):
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic):
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR100555
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34854 34854]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10121 R10121]
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR102206
−
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase|3-hydroxyadipyl-coa dehydrogenase}}
+
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.1.1.35}}
+
{{#set: common-name=3-hydroxypimeloyl-[acp] methyl ester dehydratase}}
−
{{#set: nb gene associated=8}}
+
{{#set: ec-number=ec-4.2.1.59}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-11481

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxypimeloyl-[acp] methyl ester dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR102206

Property "Common-name" (as page type) with input value "3-hydroxypimeloyl-[acp] methyl ester dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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