Difference between revisions of "AMINO-ACID-RACEMASE-RXN"

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(Created page with "Category:reaction == Reaction TRANS-CINNAMATE-4-MONOOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.13.11 ec-1.14.13.11] =...")
(Created page with "Category:reaction == Reaction AMINO-ACID-RACEMASE-RXN == * direction: ** reversible * common-name: ** amino-acid racemase * ec-number: ** [http://enzyme.expasy.org/EC/5.1....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRANS-CINNAMATE-4-MONOOXYGENASE-RXN ==
+
== Reaction AMINO-ACID-RACEMASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** amino-acid racemase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.13.11 ec-1.14.13.11]
+
** [http://enzyme.expasy.org/EC/5.1.1.10 ec-5.1.1.10]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-674]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[COUMARATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[L-Amino-Acids]][c] '''<=>''' 1 [[D-Amino-Acids]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11355]]
+
* Gene: [[SJ15468]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ11349]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11348]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09087]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-1121]], suberin monomers biosynthesis:
 
−
** '''9''' reactions found over '''20''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR107409
+
* METANETX-RXN : MNXR106895
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10609 10609]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18317 18317]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01265 R01265]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q04468 Q04468]
+
** [http://www.uniprot.org/uniprot/P17916 P17916]
−
** [http://www.uniprot.org/uniprot/P37115 P37115]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
+
{{#set: common-name=amino-acid racemase}}
−
** [http://www.uniprot.org/uniprot/P48522 P48522]
+
{{#set: ec-number=ec-5.1.1.10}}
−
** [http://www.uniprot.org/uniprot/Q42895 Q42895]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/O81928 O81928]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/O24315 O24315]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q43033 Q43033]
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-1.14.13.11}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction AMINO-ACID-RACEMASE-RXN

  • direction:
    • reversible
  • common-name:
    • amino-acid racemase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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