Difference between revisions of "RXN-12243"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-27...")
 
(Created page with "Category:reaction == Reaction RXN-12243 == * direction: ** left-to-right * common-name: ** 15-cis-phytoene desaturase ** 15-cis phytoene desaturase * synonymous: ** phytoe...")
 
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084] ==
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== Reaction RXN-12243 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
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** left-to-right
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
 
 
* common-name:
 
* common-name:
** 2-oxoglutarate decarboxylation to succinyl-coa
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** 15-cis-phytoene desaturase
== Reaction(s) found ==
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** 15-cis phytoene desaturase
* [[2OXOGLUTDECARB-RXN]]
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* synonymous:
* [[RXN-7716]]
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** phytoene desaturase (ambiguous)
* [[RXN0-1147]]
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** pds
== Reaction(s) not found ==
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** plant-type phytoene desaturase
All reactions of this pathways are in present
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== Reaction formula ==
{{#set: taxonomic-range=tax-2|tax-2157|tax-2759}}
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* 1 [[CPD-12321]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''=>''' 1 [[CPD-13171]][c] '''+''' 1 [[Plastoquinols]][c]
{{#set: common-name=2-oxoglutarate decarboxylation to succinyl-coa}}
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== Gene(s) associated with this reaction  ==
{{#set: nb reaction found=3}}
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* Gene: [[SJ08891]]
{{#set: completion rate=1.0}}
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** Category: [[annotation]]
{{#set: nb total reaction=3}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR117436
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30194 30194]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R09653 R09653]
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{{#set: direction=left-to-right}}
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{{#set: common-name=15-cis-phytoene desaturase|15-cis phytoene desaturase}}
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{{#set: synonymous=phytoene desaturase (ambiguous)|pds|plant-type phytoene desaturase}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-12243

  • direction:
    • left-to-right
  • common-name:
    • 15-cis-phytoene desaturase
    • 15-cis phytoene desaturase
  • synonymous:
    • phytoene desaturase (ambiguous)
    • pds
    • plant-type phytoene desaturase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117436
  • RHEA:
  • LIGAND-RXN: