Difference between revisions of "SJ05457"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-787 CPD-787] == * common-name: ** (2z,4z)-2-hydroxyhepta-2,4-dienedioate * smiles: ** c([o-...") |
(Created page with "Category:gene == Gene SJ05457 == * transcription-direction: ** negative * right-end-position: ** 23808 * left-end-position: ** 5078 * centisome-position: ** 5.5337 ==...") |
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| − | [[Category: | + | [[Category:gene]] |
| − | == | + | == Gene SJ05457 == |
| − | * | + | * transcription-direction: |
| − | ** | + | ** negative |
| − | * | + | * right-end-position: |
| − | ** | + | ** 23808 |
| − | * | + | * left-end-position: |
| − | ** | + | ** 5078 |
| − | * | + | * centisome-position: |
| − | ** | + | ** 5.5337 |
| − | == | + | == Organism(s) associated with this gene == |
| − | * [[ | + | * [[S.japonica_carotenoid_curated]] |
| − | + | == Reaction(s) associated == | |
| − | + | * [[HEMN-RXN]] | |
| − | {{#set: | + | ** Category: [[orthology]] |
| − | {{#set: | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * [[RXN0-1461]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[HEMESYN2-PWY]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5531]] | ||
| + | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY0-1415]] | ||
| + | ** '''5''' reactions found over '''n.a''' reactions in the full pathway | ||
| + | * [[CHLOROPHYLL-SYN]] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7159]] | ||
| + | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[HEME-BIOSYNTHESIS-II]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=23808}} | ||
| + | {{#set: left-end-position=5078}} | ||
| + | {{#set: centisome-position=5.5337 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=2}} | ||
| + | {{#set: nb pathway associated=6}} | ||
Latest revision as of 11:01, 18 March 2021
Contents
Gene SJ05457
- transcription-direction:
- negative
- right-end-position:
- 23808
- left-end-position:
- 5078
- centisome-position:
- 5.5337
Organism(s) associated with this gene
Reaction(s) associated
- HEMN-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN0-1461
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- HEMESYN2-PWY
- 3 reactions found over 4 reactions in the full pathway
- PWY-5531
- 4 reactions found over 9 reactions in the full pathway
- PWY0-1415
- 5 reactions found over n.a reactions in the full pathway
- CHLOROPHYLL-SYN
- 6 reactions found over 9 reactions in the full pathway
- PWY-7159
- 5 reactions found over 9 reactions in the full pathway
- HEME-BIOSYNTHESIS-II
- 4 reactions found over 4 reactions in the full pathway
